B

bacteria

PlasBin-HMF is a CLI tool to perfom plasmid binning in short read assembly graph. It relies on a global optimization problem based on a multi-flow approach, where the flows on the arcs are proxy of the abundance of the DNA molecule in the sample.

Modules for genotyping and characterisation of bacterial isolates utilizing whole-genome-sequencing data

Predicting pathogenic potentials of short DNA reads with reverse-complement deep neural networks.

This is the script for the bacterial FHN model that we reported in Startford et al., PNAS (2019). https://doi.org/10.1073/pnas.1901788116

ARpip

Various designs for labware to use in microbiology laboratory, including customisable agar dishes, inoculation loops for plating bacterial samples, and pin replicators to plate bacterial samples onto multiple agar dishes.

Le projet« BIOINDIC, Amélioration des connaissances et des pratiques – indicateurs biologiques », a proposé de comparer des écosystèmes restaurés à des écosystèmes « naturels » adjacents sur substrats ultramafiques.

Resumen de los documentos generados en el análisis metagenómico entre el Salar de Huasco y Lirima.