Commits · main · M-UNLOCK / CWL

Feb 21, 2025
- sylph-tax WIP · ace34bb5
  bart authored 1 month ago
  
  ace34bb5
- sylph taxonomic profiler · 21a67a14
  bart authored 1 month ago
  
  21a67a14
- Merged dev into main, HUMAnN3 workflow upgrade · 34a50172
  bart authored 1 month ago
  
  34a50172
Jan 31, 2025
- Merge branch 'dev' into 'main' · b3bf8367
  bart authored 1 month ago
  b3bf8367
- Dev · 7a117e7e
  Mike Loomans authored 1 month ago and bart committed 1 month ago
  
  7a117e7e
Jan 13, 2025
- bloom filter turned off · 31ea5b8f
  Jasper Koehorst authored 2 months ago
  
  31ea5b8f
Aug 07, 2024
- Revert "Merge branch 'dev' into 'main'" · 022f3e4a
  bart authored 7 months ago
  022f3e4a
- Merge branch 'dev' into 'main' · 99d86489
  bart authored 7 months ago
  99d86489
- Dev · 84884c08
  bart authored 7 months ago
  
  84884c08
Jul 19, 2024
- Merge branch 'dev' into 'main' · f20d96f1
  bart authored 8 months ago
  f20d96f1
- update packed · d91aa9e8
  bart authored 8 months ago
  
  d91aa9e8
- Merge branch 'dev' · b9624222
  bart authored 8 months ago
  
  b9624222
- Merge branch 'main' into dev · 4646e08f
  bart authored 8 months ago
  
  4646e08f
Jul 18, 2024
- update packed · a9f26354
  bart authored 8 months ago
  
  a9f26354
- update container version · 0bb68de7
  bart authored 8 months ago
  
  0bb68de7
- update packed · 3e557076
  bart authored 8 months ago
  
  3e557076
- add interproscan_application to wf input · dd18bf60
  bart authored 8 months ago
  
  dd18bf60
- sort of standardization · 552d09bd
  bart authored 8 months ago
  
  552d09bd
- change default bracken levels, not all databases have them all · a2f8b54a
  bart authored 8 months ago
  
  a2f8b54a
- version bump · 78bc3a6b
  bart authored 8 months ago
  
  78bc3a6b
- ARG CACHEBUST=1 added to force build from that step onwards · bd99c492
  Jasper Koehorst authored 8 months ago
  
  bd99c492
- all in 1 docker · 3b8ab3dc
  Jasper Koehorst authored 8 months ago
  
  3b8ab3dc
- docker environment added · 7644d4a9
  Jasper Koehorst authored 8 months ago
  
  7644d4a9
Jun 21, 2024
- fix pypolca · ff4b951f
  Changlin Ke authored 9 months ago
  
  ff4b951f
- removing some redudent comment/text · 89acbe78
  Changlin Ke authored 9 months ago
  
  89acbe78
Jun 17, 2024
- Merge branch 'dev' of gitlab.com:m-unlock/cwl into dev · 029ee751
  Changlin Ke authored 9 months ago
  
  029ee751
- update pypolca and add to main wf · f6cdf896
  Changlin Ke authored 9 months ago
  
  f6cdf896
- update pypolca and add to main wf · f93821bc
  Changlin Ke authored 9 months ago
  
  f93821bc
Jun 14, 2024
- compress bakta svg · d821f383
  bart authored 9 months ago
  
  d821f383
May 23, 2024
- seems to be working now · 77518255
  bart authored 10 months ago
  
  77518255
- rename output files with given identifier · 4e0b9105
  bart authored 10 months ago
  
  4e0b9105
May 22, 2024
- sort of complete but not tested · 3293b004
  bart authored 10 months ago
  
  3293b004
- updates · dd57e224
  bart authored 10 months ago
  
  dd57e224
- humann_unpack_pathway tool · 48b788a8
  bart authored 10 months ago
  
  48b788a8
May 21, 2024
- humann3 workflow WIP · 3294f1fc
  bart authored 10 months ago
  
  3294f1fc
- fixes · fc80011f
  bart authored 10 months ago
  
  fc80011f
- metaphlan4 tool · 3c032440
  bart authored 10 months ago
  
  3c032440
- interleave fastq tool · d4a60b3b
  bart authored 10 months ago
  
  d4a60b3b
- update to docker version · 8d041730
  bart authored 10 months ago
  
  8d041730
- optional plot output · 64df56af
  bart authored 10 months ago
  
  64df56af