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Updated date
Use our new comparison engine in annomerge
hybran!52
· created
Mar 26, 2024
by
Afif Elghraoui
Merged
updated
Mar 29, 2024
Proper multi-contig handling for `hybran compare`
hybran!51
· created
Mar 19, 2024
by
Afif Elghraoui
Merged
updated
Mar 19, 2024
Avoid Biopython deprecations
hybran!50
· created
Mar 05, 2024
by
Theron James
Merged
updated
Mar 15, 2024
Consider translation exceptions while identifying internal stops
hybran!49
· created
Jan 29, 2024
by
Theron James
Merged
17
updated
Mar 14, 2024
Non-disruptive coordinate updates (closes #70)
hybran!48
· created
Jan 26, 2024
by
Afif Elghraoui
Merged
updated
Jan 30, 2024
fusionfisher: look for a new hybrid fusion signature
hybran!47
· created
Jan 09, 2024
by
Afif Elghraoui
Merged
updated
Jan 09, 2024
Implement Hybran subcommand "compare"
hybran!46
· created
Dec 15, 2023
by
Theron James
Merged
14
updated
Dec 29, 2023
delayed_stop calling criteria
hybran!45
· created
Jun 29, 2023
by
Afif Elghraoui
Merged
updated
Jun 29, 2023
Rejects log format
hybran!43
· created
Jun 14, 2023
by
Afif Elghraoui
Merged
updated
Jun 15, 2023
Resolve "apparent ab initio fragments may be instance of neofunctionalization despite coordinate complementarity"
hybran!42
· created
Jun 13, 2023
by
Afif Elghraoui
Merged
updated
Jun 14, 2023
Draft: New scheme for tracking and logging feature properties
hybran!40
· created
May 28, 2023
by
Afif Elghraoui
Merged
updated
Jun 08, 2023
Parser error dodging
hybran!41
· created
May 31, 2023
by
Afif Elghraoui
Merged
updated
Jun 07, 2023
modular postprocessing of RATT and Prokka
hybran!38
· created
May 18, 2023
by
Afif Elghraoui
Merged
updated
May 28, 2023
Solidifying thunderdome criteria and improvements to coord_check
hybran!39
· created
May 18, 2023
by
Theron James
Merged
updated
May 22, 2023
delimiter dodging for "|" in reference IDs and ":" in gene names (as in fusions)
hybran!36
· created
May 12, 2023
by
Afif Elghraoui
Merged
updated
May 18, 2023
Adapt reference duplicates deduplication for multiple references
hybran!34
· created
May 03, 2023
by
Afif Elghraoui
Merged
updated
May 12, 2023
Make use of all available references throughout the pipeline
hybran!37
· created
May 12, 2023
by
Afif Elghraoui
Merged
updated
May 12, 2023
Integration of stopseeker function
hybran!35
· created
May 06, 2023
by
Theron James
Merged
1
updated
May 09, 2023
Add `hybran standardize` command and make reference deduplication default
hybran!33
· created
May 02, 2023
by
Afif Elghraoui
master
Merged
updated
May 02, 2023
Lingering issues and concerns in inclusion criteria
hybran!32
· created
Apr 21, 2023
by
Afif Elghraoui
master
Merged
10
updated
Apr 30, 2023
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