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Move NBNXM function declarations into headers with defined visibility (version 2)

Artem Zhmurov requested to merge nbnxm_CleanGPUHeaders3 into master

GPU functions in NBNXM GPU module can be used from outside NBNXM GPU, or only used from within other GPU functions of NBNXM (internal). This change defines three respective headers and sorts the declarations of the functions accordingly.

Refs #2608

Refs #4045

Alternative to !1431 (closed) , where the visible functions were also divided into those visible from inside general NBNXM module (including from CPU parts of it) and those, used from outside it (e.g. from sim_utils).

Edited by Artem Zhmurov

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