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run `isort .` on the repo

Andrew Rosen requested to merge (removed):isort into master

I ran isort . on the repo to sort the imports. This is a follow-up to !2964 (closed) (and would close !2964 (closed)). Basically, we agreed that it would be fine to run isort but not to require it with a pre-commit hook, which I think is reasonable. There were some issues with whitespace cleanup in !2964 (closed), but that must have been from some tool other than isort (they are not issues in this MR).

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