brian m. carlson authored Jan 19, 2018 and Junio C Hamano committed Jan 19, 2018

There are various git subcommands (among them, clone) which don't set up
the repository (that is, they lack RUN_SETUP or RUN_SETUP_GENTLY) but
end up needing to have information about the hash algorithm in use.
Because the hash algorithm is part of struct repository and it's only
initialized in repository setup, we can end up dereferencing a NULL
pointer in some cases if we call one of these subcommands and look up
the empty blob or empty tree values.

A "git clone" of a project that has two paths that differ only in
case suffers from this if it is run on a case insensitive platform.
When the command attempts to check out one of these two paths after
checking out the other one, the checkout codepath needs to see if
the version that is already on the filesystem (which should not
happen if the FS were case sensitive) is dirty, and it needs to
exercise the hashing code at that point.

In the future, we can add a command line option for this or read it
from the configuration, but until we're ready to expose that
functionality to the user, simply initialize the repository
structure to use the current hash algorithm, SHA-1.

Signed-off-by: brian m. carlson <sandals@crustytoothpaste.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>