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Processed review comments by Simon.

Gero Vermaas requested to merge 79-code-review-on-scientist-and-sample-folders into master

Processed most of the comments as suggested, with the exception of making initialization of some variable local instead of global (boto3 AWS clients). Kept them global because initialization took 3-45ms and that would add to the Scientist overhead.

Closes #79 (closed)

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