... | ... | @@ -109,6 +109,18 @@ Reinstall cmake (or install openblas/lapack with apt-get, then cmake is not need |
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`conda install gcc`. And set the enviroment variable FC to the installed binary.
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(or install openblas/lapack with apt-get, then this step is not needed)
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## 1.5 unrecognized command line option ...
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> [ 20%] Building **proteinortho_clustering** with LAPACK ... <br>
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> g++: error: unrecognized command line option '-std=c++17'<br>
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> g++: error: unrecognized command line option '-fno-plt'<br>
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> g++: error: unrecognized command line option '-fstack-protector-strong'<br>
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> g++: error: unrecognized command line option ...<br>
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*Reason*:<br> Your enviroment variables are filled with stuff proteinortho do not like (check this with make echoENV, or echo $CXXFLAGS)<br>
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<br>*Solution*:<br>
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call with `make CXXFLAGS=""` or the LDFLAGS are the problem...<br>
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# 2. Runtime Errors
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## 2.1 cannot find XYZ
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