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Communicate walltimer aborts to the queuing system

Heiko Appel requested to merge 390-Communicate-walltimer-aborts-to-the-queuing-system into develop

Description

This MR extends the new walltimer slightly to create an empty file 'walltime_abort' when the walltimer is stopping the code. This file can be used as a communication channel to interact with the queueing system. It allows to daisy chain several octopus runs in a self-submitting job script.

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Checklist

  • I have checked that my code follows the Octopus coding standards
  • I have added tests for all the new features added in this request.

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