| ... | ... | @@ -13,14 +13,14 @@ source activate exome-analysis |
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```
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## Download CADD references
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CADD scripts are contained in this project but yo use it, you need to install CADD v.16 and download references
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CADD scripts are contained in this project but yo use it, you need to install CADD v.16 and download references.
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```
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cd pipeline/TOOLS/CADD-scripts
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./install.sh
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```
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You have to input the following answers
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You have to input the following answers.
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```
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Do you want to install the virtual environments with all CADD dependencies via conda? (y)/n y
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Do you want to install CADD v1.6 for GRCh37/hg19? (y)/n y
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| ... | ... | @@ -39,3 +39,6 @@ The following will be loaded: (disk space occupied) |
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Please make sure you have enough disk space available.
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Ready to continue? (y)/n y
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```
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## Other references
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Files required for other tools (VEP, ANNOVAR ...) will automatically be downloaded by submiting the pipeline for the first time. |
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\ No newline at end of file |
