Does isotope pattern overlay work on tandem mass spectrometric methods? E.g. neutral loss scan?
Created by: michelleting
I tried this scrip on a neutral loss scan but I got this error message. Would it be a mzml issue since tandem MS method can involve multiple functions?
C:\Users\User\AppData\Local\Programs\Python\Python37\python.exe "C:/Users/User/Documents/GitHub/PythoMS/isotope pattern overlay_MT_data.py"
Data was read from PSI-MS, please cite DOI: 10.1093/database/bat009
Using figure preset "pub"
Traceback (most recent call last):
File "C:/Users/User/Documents/GitHub/PythoMS/isotope pattern overlay_MT_data.py", line 244, in <module>
mzml = mzML(spectrum, verbose=False)
File "C:\Users\User\Documents\GitHub\PythoMS\pythoms\mzml.py", line 422, in __init__
self.nscans = int(self.tree.getElementsByTagName('spectrumList')[0].getAttribute('count')) # number of spectra
IndexError: list index out of range
Process finished with exit code 1