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Fix documentation regarding rebuilding after an update

finesse importer requested to merge fix/rebuild-docs into develop

As pointed out by @anna.green on the chat, the instructions to run make realclean after a git pull break Finesse and requires setup to be re-run. This is because make realclean removes finesse.version which finesse needs on import.

This changes the documentation to tell users to use make clean instead, which avoids removing extra files like this.

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