Fix coot-0.9.8.1

Tentative de fix pour

$ coot
INFO:: Reading coordinate file: /opt/coot-0.8.9.1/share/coot/standard-residues.pdb
 PDB file /opt/coot-0.8.9.1/share/coot/standard-residues.pdb has been read.
Spacegroup: P 1
libGL error: unable to load driver: swrast_dri.so
libGL error: failed to load driver: swrast
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/05_Hotel_Icon_Hair_Salon.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/3-c-new.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/3-c-other.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/3-c.svg?
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Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/5-c.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/6-c-arom.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/6-c-exp-2.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/6-c-shadow-experiment.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/6-c.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/7-c.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/8-c.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/Anonymous_Architetto_--_Chiave.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/TheStructorr_magnifying_glass-32.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/TheStructorr_magnifying_glass.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/Trash-hydrogens-Andy_Trash_Can.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/add-alt-conf.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/add-peptide-1.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/add-water.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/anchor.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/aniso-atom.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/atom-at-pointer.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/auto-fit-rotamer.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/azerbaijan.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/azerbaijan2.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/calculate-ghosts.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/cell+symm.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/change-chain-id.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/charge.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/chiral.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/connect-to-ccp4.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/connect-to-oca.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/connect-to-usf.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/connect-to-world.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/crosshairs.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/delete.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/density-fit.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/diff-map.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/display-manager.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/dna.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/double.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/edit-backbone.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/edit-chi.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/env-distances.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/face-smile.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/flip-peptide.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/generic-display-objects.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/geom.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/ghosts.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/gln-asn-b-factors.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/gln-asn-b-factorssvg.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/glyco-structures.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/go-to-atom.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/go-to-ligand.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/kleywegt.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/map.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/merge-molecules.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/mutate-auto-fit.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/mutate.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/peptide-omega.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/phenixed.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/pink-pointer.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/plane-distances.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/pointer-distances.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/probe-clash.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/radacina_handcuffs-small.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/refine-1.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/regularize-1.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/renumber-residues.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/reset-view-32.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/reset-view.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/residue-info.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/rigid-body.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/rotamers.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/rrz.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/rtz.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/scroll-wheel.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/secondary-structure.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/sequence-view.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/side-chain-180.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/single.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/smiles.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/sp3.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/spin-view.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/stereo-out.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/stereo-view.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/stock-zoom-follow-window-12.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/stop.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/temperature.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/torsion-general.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/triple.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/undo-1.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/unknown-blob.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/water-diff-map.svg?
Error loading icon: Couldn?t recognize the image file format for file ?/opt/coot-0.8.9.1/share/coot/pixmaps/water-drop.svg?

(coot-bin:32139): Gdk-ERROR **: 15:34:00.339: The program 'coot-bin' received an X Window System error.
This probably reflects a bug in the program.
The error was 'GLXBadContext'.
  (Details: serial 327 error_code 160 request_code 149 minor_code 6)
  (Note to programmers: normally, X errors are reported asynchronously;
   that is, you will receive the error a while after causing it.
   To debug your program, run it with the --sync command line
   option to change this behavior. You can then get a meaningful
   backtrace from your debugger if you break on the gdk_x_error() function.)
/opt/coot-0.8.9.1/bin/coot: line 284: 32139 Trace/breakpoint trap   (core dumped) $coot_bin "$@"
guile: error while loading shared libraries: libltdl.so.3: cannot open shared object file: No such file or directory