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chore: some client.aget calls should use use_http_response

What does this merge request do and why?

Updates the following files to use client.aget with use_http_response=True instead of the legacy response format

duo_workflow_service/tools/project.py
duo_workflow_service/tools/repository_files.py
duo_workflow_service/tools/search.py
duo_workflow_service/tools/user.py
duo_workflow_service/tools/work_items/base_tool.py

How to set up and validate locally

Should behave the same as this is a simple refactor

Merge request checklist

  • Tests added for new functionality. If not, please raise an issue to follow up.
  • Documentation added/updated, if needed.
  • If this change requires executor implementation: verified that issues/MRs exist for both Go executor and Node executor or confirmed that changes are backward-compatible and don't break existing executor functionality.

Closes #1507

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