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Remove `tree` method from ExtractsRef

Vasilii Iakliushin requested to merge 425379_extract_tree_from_extracts_ref into master

What does this MR do and why?

Contributes to #425379

It's another step to get rid of ExtractRefs module.

Problem

ExtractsRef module is going to be removed. #tree method is used only in TreeController.

Solution

Move tree method to the TreeController.

Edited by Vasilii Iakliushin

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