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doc/hooks: Clarify how administrators configure server hooks

Justin Tobler requested to merge jt/update-hooks-docs into master

What does this MR do and why?

doc/hooks: Clarify how administrators configure server hooks

In GitLab 15.11 a new Gitaly CLI command was introduced to enable administrators to more easily set custom Git hooks for individual repositories in Gitaly. This replaces the need for administrators to set hooks directly on the file system.

Update the documentation to mention using the Gitaly CLI instead.

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