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Fix duplicate project disk path in BackfillLegacyProjectRepositories

Stan Hu requested to merge sh-fix-backfill-project-repo-migration into master

On GitLab.com, we saw numerous duplicate disk entry inserts because the migration was not taking the routes table into account. We now implement this in the migration to be consistent.

Closes https://gitlab.com/gitlab-org/gitlab-ce/issues/56061

Edited by Toon Claes

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