Provide run_rake method in commands

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What does this merge request do and why?

Provide run_rake method in commands

Provides generic run_rake method in base command class and refactors existing rake calls to use it.

How to set up and validate locally

Numbered steps to set up and validate the change are strongly suggested.

Impacted categories

The following categories relate to this merge request:

• gdk-reliability - e.g. When a GDK action fails to complete.
• gdk-usability - e.g. Improvements or suggestions around how the GDK functions.
• gdk-performance - e.g. When a GDK action is slow or times out.

Merge request checklist

• This change is backward compatible. If not, please include steps to communicate to our users.
• Tests added for new functionality. If not, please raise an issue to follow-up.
• Documentation added/updated, if needed.
• Announcement added, if change is notable.
• gdk doctor test added, if needed.

Closes #2347 (closed)