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xengsort

Project information

a fast xenograft read sorter based on space-efficient k-mer hashing, efficiently paralellized, written in jit-compiled Python using numba. Since 2.1.0, xengsort supports also WGBS data in addition to RNA-seq, whole genome and exome data.

xenograft so... Cuckoo hashing numba Python Whole-Genome... RNA-Seq WGBS exome cancer

220 Commits
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MIT License
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Created on

June 02, 2017

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