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First implementation of type of rejection in command line. Issue #599

Cyril Richard requested to merge type_of_rej into master

We now implement the type of rejectionas an 'optional' argument in command line: stack seqfilename {rej | mean} {p | s | m | w | l} sigma_low sigma_high \[-nonorm, norm =\] \[filtering\] \[-out = filename\]

Closes #599 (closed).

Edited by Cyril Richard

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