... | ... | @@ -3,10 +3,10 @@ All output files are stored in the same output directory. If no output directory |
|
|
The following files are generated after running this program:
|
|
|
|
|
|
* `<orthologs>/...` – output alignments
|
|
|
* `<timestamp>_ppp_run.log – detailed report of each actions performed
|
|
|
* `<timestamp>_ppp_run.log` – detailed report of each actions performed
|
|
|
* `<timestamp>_ppp_ortho_stats.csv` – statistics for output alignments
|
|
|
* `<timestamp>_ppp_paralog_freq.csv – paralogy frequency data
|
|
|
* `<timestamp>_ppp_paralog_freq.png – paralogy frequency plot\*
|
|
|
* `<timestamp>_ppp_paralog_freq.csv` – paralogy frequency data
|
|
|
* `<timestamp>_ppp_paralog_freq.png` – paralogy frequency plot\*
|
|
|
|
|
|
\* – only produced if [Matplotlib](https://matplotlib.org/) is installed
|
|
|
|
... | ... | |