Bad busco result or not?
hi, Matthew
I assembled my transcriptome datasets using trinity and tried to use busco to assess the quality.
The result is as following:
Results from dataset actinopterygii_odb10 | -------------------------------------------------- |C:79.8%[S:77.8%,D:2.0%],F:6.0%,M:14.2%,n:3640 | |2903 Complete BUSCOs (C) | |2832 Complete and single-copy BUSCOs (S) | |71 Complete and duplicated BUSCOs (D) | |218 Fragmented BUSCOs (F) | |519 Missing BUSCOs (M) | |3640 Total BUSCO groups searched
Is this result not so good with 6% fragmented rate .
Thanks~~