Skip to content

Adds the functionality to search by ARO term

Chris Rands requested to merge ChrisRands/card_trick:search_by_aro into master

E.g.

>>> import card_trick
>>> card_trick.ontology_functions.search_aros('ARO:3003032')
{'ARO:3003032': {'parents': ['resistance-nodulation-cell division (RND) antibiotic efflux pump', 'efflux pump complex or subunit conferring antibiotic resistance', 'determinant of antibiotic resistance', 'process or component of antibiotic biology or chemistry'], 'antibiotics': ['erythromycin', 'amikacin', 'gentamicin C', 'ciprofloxacin', 'acriflavine', 'tetracycline', 'tobramycin', 'meropenem', 'chloramphenicol', 'norfloxacin', 'ofloxacin'], 'name': 'MexXY-OprM'}}
Edited by Chris Rands

Merge request reports