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Resolve "Replace all in_-queries with generic drop in replacement"

Vetle Simensen requested to merge 2179-replace-all-in_-queries-with-generic-drop-in-replacement into dev

Description

This MR replaces all in_-queries (unless rigorously tested) with a generic drop-in replacement to avoid performance issues. Also added tests to the ELLA mypy plugin to ensure that the generic drop-in replacement is only used whenever explicitly permitted.

Notes to review (code/docs/QA)

Related issues

Closes #2179 (closed)

Edited by Vetle Simensen

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