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1969 Add chromosome band annotation for CNVs

Tom requested to merge 1969-add-chromsome-band into dev

Description

  • Updated configurable annotation to suppport INFO CytoBand
  • Added Testdata annotated with CytoBand INFO field, output by AnnotSV.
  • Improved the Clinical Report output, see the attached file.
  • Quick fix for HGVSg in top banner

clinical_report_ELLA

Related issues

Notes to review (code/docs/QA)

Tests

General

  • Tests have been added that prove my fix is effective or that my feature works
  • Related tests have been modified/removed

Hypothesis testing:

  • Soak testing has been done
  • Distribution between positive / negative cases has been checked

Database

  • Includes changes to database schema
  • Includes necessary database migrations

Configuration

  • Includes changes to configuration
  • Includes configuration migration instructions in documentation

Closes #1959 (closed), #1969, #2104 (closed)

Edited by Morten C. Eike

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