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Resolve "Add option for GQ-threshold for de novo candidates"

Øyvind Evju requested to merge 195-fix-segregation-filterfallback into dev

Description

Minor fix to !431 (merged). Segregation filter config changed from version 1 to version 2, where version 1 config is implicit. Use this implicit config in alleledataloader for filterconfigs matching schema version 1.

Related issues

Notes to review (code/docs/QA)

Tests

General

  • Tests have been added that prove my fix is effective or that my feature works
  • Related tests have been modified/removed

Hypothesis testing:

  • Soak testing has been done
  • Distribution between positive / negative cases has been checked

Database

  • Includes changes to database schema
  • Includes necessary database migrations

Configuration

  • Includes changes to configuration
  • Includes configuration migration instructions in documentation

Merge checklist

  • Self-review of code has been performed.
  • Feature review and validation against specification has been performed (if applicable). Apply label: QAdone
  • Need for documentation has been evaluated and, if necessary, updated. Apply label: docsdone
  • Code and implementation has been reviewed by other core developer (including any changes based on initial review). Apply label: code reviewdone

Closes #195 (closed)

Edited by Morten C. Eike

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