Resolve "Improve .analysis-file for import"
Description
Added a module for reading .analysis-files with all relevant metadata related to an analysis. This is made backward-compatible with current .analysis-files, by converting these on initial load.
The implemented solution supports the following inputs:
- New format .analysis files (see #182 (closed))
- Folder (will look for a .analysis file, alternatively look for .vcf- and .ped-files in the folder)
- vcf-file
- None (sets default values only)
Related issues
Notes to review (code/docs/QA)
Tests
General
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Tests have been added that prove my fix is effective or that my feature works -
Related tests have been modified/removed
Hypothesis testing:
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Soak testing has been done -
Distribution between positive / negative cases has been checked
Database
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Includes changes to database schema -
Includes necessary database migrations
Configuration
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Includes changes to configuration -
Includes configuration migration instructions in documentation
Merge checklist
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Self-review of code has been performed. -
Feature review and validation against specification has been performed (if applicable). Apply label: QAdone -
Need for documentation has been evaluated and, if necessary, updated. Apply label: docsdone -
Code and implementation has been reviewed by other core developer (including any changes based on initial review). Apply label: code reviewdone
Closes #182 (closed)
Edited by Morten C. Eike