Skip to content

Add support for PubMed RIS format

Øyvind Evju requested to merge 1529-pubmed-ris-format into dev

Description

Closes issues: LA-1529 Related issues:

The new PubMed has no direct link to XML link from the article page, they do however have a download link to .ris-format. Added support for this format, alongside XML format.

Notes to reviewer

Tested parser against 113 000 references without error. There are quite a few differences from the XML parsing, but as far as I can tell, this is mainly punctuation and abbreviated vs written out author first name.

Type of change

Application (affects UI or general functionality):

  • New feature
  • Bug fix
  • Improvement

Ops / admin / CI related only (not impacting users):

  • New feature
  • Bug fix
  • Improvement

Tests

General

  • Tests have been added that prove my fix is effective or that my feature works
  • Related tests have been modified/removed

Hypothesis testing:

  • Soak testing has been done
  • Distribution between positive / negative cases has been checked

Database

  • Includes changes to database schema
  • Includes necessary database migrations

Configuration

  • Includes changes to configuration
  • Includes configuration migration instructions in documentation

Merge checklist

  • Self-review of code performed
  • Feature review against specification (if applicable)
  • Need for documentation has been evaluated and, if necessary, updated
  • Code and implementation is reviewed by other core developer (all changes, inc. changes based on initial review)
Edited by Svein Tore Koksrud Seljebotn

Merge request reports