feat: enable method, implementation, result, analysis and paper generation assistants with refine latex

Sasi Kiran Gaddipatirequested to merge
prompt-centralization-and-dynamic-latex-optimization into main

This branch enables the Method, Implementation, Result, and Analysis assistants. It also enables Paper generation assistants to refine Latex. Furthermore, it centralizes and updates with the Chain-of-Thought prompts for all the assistants.

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