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barplot
46b03089
·
Status 1.11.
·
Nov 01, 2016
master
c3cb25d6
·
update bowtie version pattern
·
Jul 20, 2017
version_1
d56056bc
·
Update bowtie version pattern
·
Jul 20, 2017
conda
263d65bc
·
Add channels
·
Sep 15, 2017
save_mapping
360e242d
·
fix: save_mapping now forces bowtie_mapping and hence results in a saved mapping
·
Dec 01, 2017
feature-improve_output_format-11047
7b31c3f9
·
Moved python code for JSON generation from snakefile rule to external python...
·
Dec 01, 2017
feature_kraken_unclassifiedout_10449
dd6917bd
·
Merge branch 'apptest_refactor' into 'feature_kraken_unclassifiedout_10449'
·
Dec 11, 2017
bug-concurrent_JSON_writing-11623
a011352a
·
Fixed refactoring typo in kraken output collection
·
Dec 13, 2017
bug-missing_fastqc_images-11967
5e55c8e9
·
fixed missing FastQC images in batch_report.html
·
Dec 13, 2017
fix_read_count
49350ad2
·
#8
remaining reads after trimming (get_trimmomatic_result()) tried to read...
·
Jan 02, 2018
fix_couldnt_rename_setname_12042
816487b4
·
[FIX] removed exception print for setname rename
·
Jan 15, 2018
bug_savr-dies-with-missing-files_12582
342dad98
·
Added all required input files for savr as inputs to plot_sav rule and updated documentation
·
Jan 15, 2018
bug_update-manual_11041
7f4b345a
·
Addressed Andre Fruehauf's points: Described operation of trimBetter and that...
·
Jan 15, 2018
fix_noncoloured_boxplots_se_12168
51c43f36
·
[FIX] non-coloured boxplots for single-end data
·
Jan 15, 2018
feature_insert-size-from-mapping_7772
d1189330
·
Added estimation of fragment length
·
Jan 15, 2018
fix_kraken_5perc_11729
0f2d474f
·
[FEATURE] Kraken batch report plot based on first 10 hits instead of all hits below 5%
·
Jan 16, 2018
feature_insert-size-in-batchreport
c269c33d
·
Added plot of fragment length distribution to batch report
·
Jan 16, 2018
bug_too-many-xmls-required-for-savr
6005c901
·
Fixed sav requiring xml files that are not present in HiSeq runs
·
Jan 16, 2018
qcumber_ng
702ceb0c
·
working SE mapping
·
Feb 14, 2018
test-suite-development
17fc4437
·
fixed variable name in config file
·
May 15, 2018
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