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Fix broken video/full frame recording time dep stimulus and other fixes

David Tadres requested to merge Bug_video_time_dep into master

  1. Updated transistor to currently available in both the standard and HP BOMs.

  2. Add option to emboss stimulus in video during video conversion (#97 (closed)).

  3. Fix broken 640x480 undistort (See #95 (closed)).

  4. Addressed #96 (closed): Video recording and full frame image recording time dependent stimulus is now based on time (not index as was before 1.7.0).

  5. Renamed stimulus file for video and full frame recording from 'data.csv' to 'stimulation_presented.csv' and 'stimulation_file_used.csv' (#40 (closed)). Also updated docs to reflect those changes.

  6. Fixed additional typos in docs.

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