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EncApp: do not read from start when we reached eos

Xu Guangxin requested to merge github/fork/xuguangxin/stdin into master

before this commit, following command will never end cat xxx.y4m | SvtAv1EncApp -i stdin -b xxx.ivf

This will fix #382 (closed)

The input/output module really in a mess. we'd better take some time to refact it in the near future

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