B

bioinformatics

OTP, One Touch Pipeline, Documentation at https://one-touch-pipeline.gitlab.io/otp/

https://pheno.teahann.com

Armadillo: fast C++ library for linear algebra (matrix maths) & scientific computing - https://arma.sourceforge.net

Main monorepo for GenomicOS

Common Workflow Language - computational workflows @ UNLOCK

SeqExtract searches annotated genomes for keywords and extract corresponding fasta records

A bioinformatic pipeline for identifying giant viruses and Preplasmiviricota viruses in metagenomic data.

A simple bash script to install bioinformatics tools that require x86_64 architecture.

a JavaScript conversion tool for Open Data Science URIs

Automated drug repurposing workflow for rare diseases – using Flask, Monarch API, DGIdb API and XGboost.

Proteinortho is a tool to detect orthologous genes within different species. (Download)

DAPCy is a Python implementation of the Discriminant Analysis of Principal Components (DAPC) method for population genetics.

https://uhasselt-bioinfo.gitlab.io/dapcy/

A Swiss Knife suite to manage pipeline environments

Little utilities to work with fasta files.

Bulk RNA-seq differential expression analysis of three tissues: brain, colon and lung

DuploMap is designed to improve precision and recall of long-read alignments in segmental duplications.

Resources and materials for students of BCHM5400N - Essentials of Bioinformatics at the University of Lethbridge

BioInterface is a Biopython based package that extracts Protein-DNA interfaces in a PDB structures.