Commit 0530415a authored by Anders Sejr Hansen's avatar Anders Sejr Hansen
Browse files

minor update

parent 82f62763
File deleted
......@@ -65,11 +65,16 @@ metadata. But it should hopefully be straightforward to modify it by
using the exisiting file as a template.
## Spot-On reads 4DN SPT format
We have recently updated the
[web-version of Spot-On](https://spoton.berkeley.edu) to read the 4DN
format. So you can download any of the publically available 4DN SPT
To analyze SPT data in the 4DN format with
[web-version of Spot-On](https://spoton.berkeley.edu) please use the
[4DN SPT splitter](https://tjian-darzacq-lab.gitlab.io/Split_4DN_format/)
to split the merged 4DN file into SPT datasets for individual cells
(full code
[here](https://gitlab.com/tjian-darzacq-lab/Split_4DN_format) written
by Maxime Woringer).
This way, you can download any of the publically available 4DN SPT
datasets from the
[4DN Data Portal](https://data.4dnucleome.org/) and immediate upload
[4DN Data Portal](https://data.4dnucleome.org/) and upload
them to (Spot-On](https://spoton.berkeley.edu) to analyze them.
## Issues
......
Markdown is supported
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment