Commit cef9cfe5 authored by Ross Carter's avatar Ross Carter

added very simple mass action example and corresponding paraview state

file
parent 372508ba
1 0 0
MassAction::TwoToOne 1 2 3 0
0.1 # k_1
6 # r1_cell
7 # r2_cell
8 # P_cell
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# Example file for a single square cell in 2D
1 4 4 # NumCell NumWall NumVertex
0 0 -1 0 1 # connections: edge_label cell1 cell2 vertex1 vertex2
1 0 -1 0 2
2 0 -1 1 3
3 0 -1 2 3
4 2 # NumVertex Dimension
0.0 0.0 # Positions of vertices
1.0 0.0
0.0 1.0
1.0 1.0
4 1 4 # NumEdge NumLength NumVariable
1.0 0.0 0.0 0 0 # RestLength variable1 .. vN
1.0 0.0 0.0 0 0
1.0 0.0 0.0 0 0
1.0 0.0 0.0 0 0
1 9 # NumCell NumVariable
0.0 10.0 10.0 10.0 0.0 0 10.0 5.0 2.0 #variable0 .. vN
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# This file is setting the parameters for the solver to use in the
# simulations. See documentation for availble solvers.
RK5Adaptive # solver to be used
0 15 # start time, end time (default 0 10)
1 50 # output format (1->vtk), data points (2 10)
0.5 1e-5 # max step, error tolerance (0.1 1e-5)
# Example file for two connected 2D square cells in 2D
2 7 6 # NumCell NumWall NumVertex
0 0 -1 0 1 # connections: edge_label cell1 cell2 vertex1 vertex2
1 0 -1 0 2
2 0 -1 1 3
3 0 1 2 3
4 1 -1 3 5
5 1 -1 5 4
6 1 -1 4 2
6 2 # NumVertex Dimension
0.0 0.0 # Positions of vertices
1.0 0.0
0.0 1.0
1.0 1.0
0.0 2.0
1.0 2.0
7 1 4 # NumEdge NumLength NumVariable
1.0 0.0 0.0 0 0 # RestLength variable1 .. vN
1.0 0.0 0.0 0 0
1.0 0.0 0.0 0 0
1.0 0.0 0.0 0 0
1.0 0.0 0.0 0 0
1.0 0.0 0.0 0 0
1.0 0.0 0.0 0 0
2 10 # NumCell NumVariable
0.0 1.0 1.0 1.0 0.0 0 0 0 0 1 #variable0 .. vN
0.0 1.0 1.0 1.0 0.0 0 0 0 0 0
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