Store more complete metadata in scan captures (e2e1783a) · Commits · OpenFlexure / openflexure-microscope-server

openflexure_microscope/plugins/default/scan/plugin.py

+11 −1

Original line number	Diff line number	Diff line
		@@ -99,9 +99,10 @@ class ScanPlugin(MicroscopePlugin):

		metadata.update(
		{
		"position": self.microscope.state["stage"]["position"],
		"scan_id": scan_id,
		"basename": basename,
		"microscope_settings": self.microscope.read_config(),
		"microscope_state": self.microscope.state,
		"microscope_id": self.microscope.id,
		"microscope_name": self.microscope.name,
		}
		@@ -145,6 +146,15 @@ class ScanPlugin(MicroscopePlugin):
		if "time" not in metadata:
		metadata["time"] = generate_basename()

		metadata.update({
		"scan_parameters": {
		"step_size": step_size,
		"grid": grid,
		"style": style,
		"autofocus_dz": autofocus_dz
		}
		})

		# Check if autofocus is enabled
		if (
		autofocus_dz