Update getting-started/.gitkeep, getting-started/accessing-the-chalawan.rst, getting-started/connection-from-outside.rst, getting-started/getting-an-account.rst, getting-started/job-submission.rst, getting-started/trnsferring-data.rst, getting-started/using-module-environment.rst, running-jobs/.gitkeep, running-jobs/job-management.rst, running-jobs/running-parallel-jobs.rst, running-jobs/slurm-cheatsheet.rst, running-jobs/slurm-workload-manager.rst, software/.gitkeep, software/application-guides.rst, software/general-comment.rst, software/linux.rst, software/missing-new.rst, software/new-software.rst, software/python.rst, software/software-module.rst, software/which-software.rst, getting-help/.gitkeep, getting-help/contact-us.rst, getting-help/faq.rst files