Commits · main · Martin Frith / last

26 May, 2022 3 commits
- Update test for the -uRY -m2 change just now · 2057d377
  Martin Frith authored May 26, 2022
  
  2057d377
- Use GNU Parallel --round, update docs · 493d07da
  Martin Frith authored May 26, 2022
  
  493d07da
- Make -uRY options set lastal -m2: faster · 2a183d5a
  Martin Frith authored May 26, 2022
  
  2a183d5a
18 May, 2022 2 commits
- lastal: increase batch size with multi-thread · d0f7cc98
  Martin Frith authored May 18, 2022
  
  d0f7cc98
- Fix lastal file-reading slowness: fixes #11 · 1705b461
  Martin Frith authored May 18, 2022
  
  1705b461
15 May, 2022 3 commits
- maf-cut: add sequence-cutting feature · dbde882d
  Martin Frith authored May 16, 2022
  
  dbde882d
- Refactor · 9d8a6b17
  Martin Frith authored May 16, 2022
  
  9d8a6b17
- Refactor · 2ff122e4
  Martin Frith authored May 16, 2022
  
  2ff122e4
09 May, 2022 2 commits
- Allow >1 pattern per line in a seed file · 630e4149
  Martin Frith authored May 09, 2022
  
  630e4149
- Refactor · a6867859
  Martin Frith authored May 09, 2022
  
  a6867859
08 May, 2022 4 commits
- Refactor · b21fa27e
  Martin Frith authored May 09, 2022
  
  b21fa27e
- Refactor · 57965a98
  Martin Frith authored May 09, 2022
  
  57965a98
- Refactor · 5586aba1
  Martin Frith authored May 09, 2022
  
  5586aba1
- Refactor · be2a5b1e
  Martin Frith authored May 09, 2022
  
  be2a5b1e
26 Apr, 2022 1 commit
- Improve the last-split doc · 4368be91
  Martin Frith authored Apr 26, 2022
  
  4368be91
19 Apr, 2022 1 commit
- Try to improve the documentation a bit · 5785dc0f
  Martin Frith authored Apr 19, 2022
  
  5785dc0f
18 Apr, 2022 3 commits
- last-split: read just 1 query at a time · 335fd647
  Martin Frith authored Apr 18, 2022
  
  335fd647
- last-bisulfite: preserve order of queries · 73ec51c0
  Martin Frith authored Apr 18, 2022
  
  73ec51c0
- Refactor · 2b280feb
  Martin Frith authored Apr 18, 2022
  
  2b280feb
17 Apr, 2022 1 commit
- lastal: more efficient multi-threading, maybe · fad49d1b
  Martin Frith authored Apr 18, 2022
  
  fad49d1b
14 Apr, 2022 6 commits
- Refactor · 34339f10
  Martin Frith authored Apr 14, 2022
  
  34339f10
- lastal: print 1 query's alignments all together · 6f4273b1
  Martin Frith authored Apr 14, 2022
  
  6f4273b1
- Refactor · f94e96ad
  Martin Frith authored Apr 14, 2022
  
  f94e96ad
- Refactor · e093001e
  Martin Frith authored Apr 14, 2022
  
  e093001e
- Refactor · b85c1523
  Martin Frith authored Apr 14, 2022
  
  b85c1523
- Refactor · a2caba0d
  Martin Frith authored Apr 14, 2022
  
  a2caba0d
13 Apr, 2022 1 commit
- Update the FAQ · 4c1bf76b
  Martin Frith authored Apr 13, 2022
  
  4c1bf76b
12 Apr, 2022 1 commit
- Make tantan masking faster (SIMD) · e9ba6020
  Martin Frith authored Apr 12, 2022
  
  e9ba6020
22 Feb, 2022 1 commit
- maf-convert AA/codon to blast: translate gaps · 4c2ff447
  Martin Frith authored Feb 22, 2022
  
  4c2ff447
08 Feb, 2022 6 commits
- Fix maf-convert protein/codon to blast! · c0445953
  Martin Frith authored Feb 08, 2022
  
  c0445953
- maf-convert protein/codon to blast: translate · 61c4e5c4
  Martin Frith authored Feb 08, 2022
  
  61c4e5c4
- Prettify maf-convert protein/codon to blast... · 560c9217
  Martin Frith authored Feb 08, 2022
  
  560c9217
- Fixing maf-convert protein/codon to blast... · 0d1d556a
  Martin Frith authored Feb 08, 2022
  
  0d1d556a
- Make maf-convert to blast much faster · b595bc8b
  Martin Frith authored Feb 08, 2022
  
  b595bc8b
- Make maf-convert to blast a bit faster · 24ae8737
  Martin Frith authored Feb 08, 2022
  
  24ae8737
07 Feb, 2022 1 commit
- maf-convert: same indent within 1 blast alignment · 7af6db23
  Martin Frith authored Feb 07, 2022
  
  7af6db23
04 Feb, 2022 1 commit
- lastal: print number of query letters at the end · 49c0910b
  Martin Frith authored Feb 04, 2022
  
  49c0910b
03 Feb, 2022 2 commits
- maf-cut: make the coordinates always be + strand · e5209f12
  Martin Frith authored Feb 03, 2022
  
  e5209f12
- Avoid C++ undefined behavior more strictly · b563b8ad
  Martin Frith authored Feb 03, 2022
  
  b563b8ad
17 Dec, 2021 1 commit
- Document ARM compilation (thanks: Alicia Clum) · 318c3381
  Martin Frith authored Dec 17, 2021
  
  318c3381