Effect size in output
Hi again, thank you for your help with printing the p-values earlier. I was wondering if something similar can be done to have the estimated effect size per pattern? I can see that the numerical value is noted in the 'weight' column in patterns.txt but the sign does not agree with what is given in the visualisation? I'm looking at some results where the graphic output states effect sizes of 6.93e-01, -7.05e-01 and -5.4e-01 for some unitigs (see attached screenshot) but when I look for the corresponding patterns in step2/patterns.txt, the weight column has the same numbers but all values are positive, e.q. : pattern q-value weight wald_statistic 382636 1.05596749568e-08 0.705262 7.90666826011863 382637 0.00126721212274667 0.5401973 5.92664787581493 84505 0.00336229822128889 0.6939245 5.52764041256297
Sorry if it's not clear and sorry for the formatting, I can't figure out how to force a line break in the text.
Thanks, Best regards, Henrike