Updating Changelog and TODO

parent df4cd857
Done v0.5.2:
-Fixed various issues with the building process and the precompiled binary:
-The precompiled binary was not portable enough. Now we added a script to create a portable binary inspired by https://pmelsted.wordpress.com/2015/10/14/building-binaries-for-bioinformatics/.
-The script can be found in folder portable_binary_builder
-Fixed some bugs with CMAKE_ARGS in boostSuperBuild/SuperBuild.cmake
-Added five new parameters to deal with binary incompatibility of the executables that are bundled with DBGWAS (GEMMA, Blast suite, phantomjs):
<TODO>: put the 5 parameters
Done v0.5.1:
-Fixed compilation issues
-Due to this issue: https://gitlab.com/leoisl/dbgwas/issues/2 (reported by mail from the user of issue https://gitlab.com/leoisl/dbgwas/issues/1 )
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TODO list
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Paper:
-Fix gemma binary
-Test on old ubuntu, debian, centOs, and fedora
-Test on old ubuntu, debian, centOs, etc
-Put S1 online, and increment it to be a user-manual
- nc_db e pt_db para nc-db e pt-db
-Table to track the performance of DBGWAS
-Subsampling SA, PA and TB big datasets
-100, 250, 500, 1000, 2500, 5000 10000
-Create the input files [MAGALI]
-Run once each point
-no-annotations
-no-newick
-8 cores
-Log the time and memory for each point
-Parse output file and create the following table:
Species Nb_Genome RunNb Time Mem
-Magali generate the graph
Next release (v0.5.2 ETA 31/05/2018):
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