Getting random "Database is not empty!" when a job is run on jenkins

Master_D11/319

10:21:00 koha_1       | Running [sudo koha-shell kohadev -p -c 'PERL5LIB=/kohadevbox/koha:/kohadevbox/qa-test-tools perl /kohadevbox/misc4dev/populate_db.pl -v --opac-base-url http://kohadev.myDNSname.org:8080 --intranet-base-url http://kohadev-intra.myDNSname.org:8081 --marcflavour MARC21']...
10:21:00 db_1         | 2021-06-17  8:20:56 9 [Warning] InnoDB: Table mysql/innodb_table_stats has length mismatch in the column name table_name.  Please run mysql_upgrade
10:21:00 db_1         | 2021-06-17  8:20:56 9 [Warning] InnoDB: Table mysql/innodb_index_stats has length mismatch in the column name table_name.  Please run mysql_upgrade
10:21:00 db_1         | 2021-06-17  8:20:56 9 [Warning] InnoDB: Table mysql/innodb_table_stats has length mismatch in the column name table_name.  Please run mysql_upgrade
10:21:00 db_1         | 2021-06-17  8:20:56 9 [Warning] InnoDB: Table mysql/innodb_index_stats has length mismatch in the column name table_name.  Please run mysql_upgrade
10:21:00 koha_1       | Database is not empty! at /kohadevbox/misc4dev/populate_db.pl line 101.
10:21:00 koha_koha_1 exited with code 1
10:21:00 Stopping koha_db_1          ... 
10:21:00 Stopping koha_memcached_1   ...