Expose a proper API
Something like this should be feasible:
d = Deformetrica(...)
res = d.estimate_deterministic_atlas(...)
# do something with res
Methods that need to be implemented:
-
estimate_deterministic_atlas -
estimate_bayesian_atlas -
estimate_longitudinal_atlas with gradient ascent -
estimate_longitudinal_atlas with McmcSaem -
estimate_affine_atlas -
estimate_longitudinal_registration -
estimate_geodesic_regression -
compute_parallel_transport -
compute_shooting
Other tasks:
-
cleanup launcher folder: remove unused methods
Edited by Benoit Martin