Commit 82d33fb9 authored by Alexandre Bône's avatar Alexandre Bône

Update README.md

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## References
Deformetrica relies on a control-points-based instance of the Large Deformation Diffeomorphic Metric Mapping framework, introduced in [\[Durrleman et al. 2014\]](https://linkinghub.elsevier.com/retrieve/pii/S1053811914005205). Are fully described in this article the **shooting**, **registration**, and **deterministic atlas** applications. Equipped with those fundamental building blocks, additional applications have been successively developed:
- the bayesian atlas application, described in [\[Gori et al. 2017\]](https://hal.archives-ouvertes.fr/hal-01359423/);
- the geodesic regression application, described in [\[Fishbaugh et al. 2017\]](https://www.medicalimageanalysisjournal.com/article/S1361-8415(17)30044-0/fulltext);
- the parallel transport application, described in [\[Louis et al. 2018\]](https://www.researchgate.net/publication/319136479_Parallel_transport_in_shape_analysis_a_scalable_numerical_scheme);
- the longitudinal atlas application, described in [\[Bône et al. 2018a\]](https://www.researchgate.net/publication/324037371_Learning_distributions_of_shape_trajectories_from_longitudinal_datasets_a_hierarchical_model_on_a_manifold_of_diffeomorphisms).
- the bayesian atlas, described in [\[Gori et al. 2017\]](https://hal.archives-ouvertes.fr/hal-01359423/);
- the geodesic regression, described in [\[Fishbaugh et al. 2017\]](https://www.medicalimageanalysisjournal.com/article/S1361-8415(17)30044-0/fulltext);
- the parallel transport, described in [\[Louis et al. 2018\]](https://www.researchgate.net/publication/319136479_Parallel_transport_in_shape_analysis_a_scalable_numerical_scheme);
- the longitudinal atlas, described in [\[Bône et al. 2018a\]](https://www.researchgate.net/publication/324037371_Learning_distributions_of_shape_trajectories_from_longitudinal_datasets_a_hierarchical_model_on_a_manifold_of_diffeomorphisms) and [\[Bône et al. 2020\]](https://www.researchgate.net/publication/342642363_Learning_the_spatiotemporal_variability_in_longitudinal_shape_data_sets).
[\[Bône et al. 2018b\]](https://www.researchgate.net/publication/327652245_Deformetrica_4_an_open-source_software_for_statistical_shape_analysis) provides a concise reference summarizing those functionalities, with unified notations.
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