Possible l-bfgs improvements - Redmine #2641
Minimization of even small molecules to convergence is problematic in GROMACS. I am finding that energy minimization not always succeeds, even for very simple molecules such as 2-octanol or pentoxypentane. This leads to problems when you want to do a normal mode analysis based on that structure.
It would be useful to have a minimizer that does go all the way to zero force (steepest descents doesn’t do it either).
To reproduce the problem, unpack the archive, then run
gmx_d grompp
gmx_d mdrun
It will finish with:
“Energy minimization has stopped, but the forces have not converged to
the
requested precision Fmax < 0.001”
(from redmine: issue id 2641, created on 2018-09-11 by dspoel, closed on 2019-04-05)
- Relations:
- relates #1593 (closed)
- Changesets:
- Revision 23c57b58 on 2019-04-05T08:15:28Z:
Fixes bug in l-bfgs.
l-bfgs should now work excatly as it was in 4.6.5,
up-to some numerical precision in forces and energies.
Fixes #2641
Change-Id: I11a85a4241cc933fef94e2095dd8c3cbbb28b01b