Reduce false positives in flaky test classification and expand issue creation beyond top 10
## Problem
ci-alerts currently creates tracking issues for the global top 10 pipeline-blocking flaky tests. We investigated whether expanding this would help teams reduce flaky test occurrences and found two problems.
**1. The top 10 barely covers the problem.** There are 475 tests classified as flaky in the last 14 days, blocking 9,073 pipelines. The top 10 covers only 10.2% of blocked pipelines and reaches only 6 out of 41 affected groups. Most teams get zero tracking issues despite having dozens of flaky tests.
**2. The 475 number is inflated by false positives.** Looking at a sample pipeline (https://gitlab.com/gitlab-org/gitlab/-/pipelines/2393138251), many "flaky" tests are actually casualties of wider pipeline failures where everything fails. 67% of classified flaky tests get 80%+ of their failures from pipelines where 10+ other test files also failed. These are infrastructure failures, not flaky tests.
After filtering out mass-failure casualties (tests where <20% of failures are isolated), the genuine flaky test count drops from 475 to approximately 154 across 31 groups.
## Analysis
### Current state: global top 10
| Strategy | Issues created | Blocked pipelines covered | % coverage | Groups reached |
|----------|---------------|--------------------------|------------|----------------|
| Global top 10 | 10 | 920 | 10.2% | 6 |
| Global top 50 | 50 | 2,349 | 25.9% | 18 |
The global ranking concentrates issues in a few groups with the worst individual offenders. Groups like `security_insights` (61 flaky tests, 957 blocked pipelines) and `source_code` (47 tests, 831 blocked pipelines) get zero tracking issues.
### With mass-failure filtering applied
After excluding tests where 80%+ of failures come from pipelines with 10+ co-failing files:
| Strategy | Issues created | Blocked pipelines covered | % coverage | Groups reached |
|----------|---------------|--------------------------|------------|----------------|
| Top 3 per group | 69 | 1,625 | 70.6% | 31 |
| Top 5 per group | 93 | 1,876 | 81.5% | 31 |
| All genuine flaky | 154 | 2,303 | 100% | 31 |
Per-group ranking with mass-failure filtering is dramatically more effective: top 3 per group creates 69 high-confidence issues covering 70.6% of genuine blocked pipelines across all 31 affected groups.
### Pipeline co-failure distribution
Out of all pipelines with test failures in the last 14 days:
| Files failing in pipeline | Pipeline count | % |
|--------------------------|---------------|---|
| 1 file (isolated) | 1,619 | 50.9% |
| 2-3 files | 794 | 25.0% |
| 4-10 files | 459 | 14.4% |
| 11-50 files | 229 | 7.2% |
| 50+ files | 78 | 2.5% |
About 10% of pipelines have 10+ files failing simultaneously, which strongly suggests infrastructure or environment issues rather than individual test flakiness.
### Are mass failures random or consistent?
We checked whether the same files always co-fail (suggesting shared root cause) or different files fail each time (suggesting infrastructure):
| Appearance rate in mass-failure pipelines | File count | % |
|------------------------------------------|-----------|---|
| <5% (rare, likely random victim) | 2,045 | 91.9% |
| 5-19% (occasional) | 145 | 6.5% |
| 20%+ (frequent co-failer) | 36 | 1.6% |
92% of files that appear in mass-failure pipelines show up in less than 5% of those pipelines, meaning the failing file sets are mostly random. This is the signature of infrastructure issues.
The 36 files (1.6%) that appear in 20%+ of mass-failure pipelines are all E2E tests (`qa/specs/features/`) clustered around 31-38% appearance rate across many different groups. This pattern suggests a shared E2E infrastructure issue (browser/staging environment) rather than individual test flakiness or cascading failures. If it were cascading failures from one test, we'd expect one test at a much higher rate than the others.
### Nuance: co-failure doesn't always mean "not flaky"
The co-failure filter is a strong signal but not absolute. There are legitimate scenarios where genuinely flaky tests co-fail:
- **Shared state contamination**: a flaky test corrupts the database or leaves behind state that causes subsequent tests in the same job to fail
- **Shared flaky dependency**: multiple test files depend on the same flaky service (Redis, Elasticsearch) and when it hiccups, they all fail together
- **Consistent co-failure pairs**: two or three tests always fail together because they share a setup issue
The data shows these cases are rare (only 36 out of 2,226 files are frequent co-failers, and those are E2E infrastructure-related). But the co-failure filter should be tuned rather than treated as a hard cutoff. Options:
1. **Discount rather than exclude**: instead of excluding tests with 80%+ mass-failure rate, count only their isolated failures when ranking. A test with 50 total blocked pipelines but only 5 isolated ones would rank based on 5, not 50.
2. **Job-level co-failure instead of pipeline-level**: check if multiple test files fail in the same CI job (which runs a single test suite) rather than the same pipeline (which runs many jobs). Job-level co-failure is a stronger signal of shared state contamination.
3. **Exclude only when co-failure set is random**: if the same 3 files always co-fail, treat them as genuinely flaky. If a file co-fails with different files each time, it's likely an infrastructure victim.
## Proposal
### Phase 1: Reduce false positives
Add a co-failure-based discount to the flaky test ranking in ci-alerts. Rather than a hard cutoff, use isolated failure count (failures from pipelines where <10 other files failed) as the ranking metric instead of total blocked pipelines. This preserves genuinely flaky tests that happen to co-fail while deprioritizing infrastructure victims.
The threshold of "10 co-failing files" should be configurable so we can tune it based on observed results.
### Phase 2: Switch from global top N to per-group top N
Replace the global top 10 with per-group top 3. This creates ~69 issues (vs 10 today) but ensures every affected group gets their worst offenders surfaced. The per-group approach distributes accountability rather than concentrating it.
### Phase 3: Expand gradually
Once teams are handling top 3, expand to top 5 per group (~93 issues, 81.5% coverage). Evaluate whether further expansion is needed based on whether the flaky test count is trending down.
## Open questions
1. Should the co-failure threshold be at the pipeline level (10+ files failing in the same pipeline) or job level (multiple files failing in the same job)? Job-level would be more precise but requires different data.
2. Should we use "discount" (rank by isolated failures) or "exclude" (remove tests above a co-failure threshold)? Discounting is safer but may still surface some false positives.
3. How does this interact with #464 (fail-then-pass flaky definition)? The fail-then-pass approach may naturally avoid the mass-failure false positive since a test must also pass in the same job.
4. Should we separate E2E and backend test rankings? The co-failure patterns are very different between the two (E2E has much higher co-failure rates due to shared browser/staging infrastructure).
## Related
- #464 - Update flaky test issue creation to include fail-then-pass definition
- #550 - Consolidate test health classification thresholds into a shared module
- https://gitlab.com/groups/gitlab-org/quality/-/work_items/346 - Test Metric Sections epic
issue
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