Commit 90ca1f0e authored by José Mª Escartín's avatar José Mª Escartín
Browse files

Assorted inconsequential edits.

* Add links to STM articles.
* Minor edits to Author lines.
* Change to carriage return in unfolding/index.rst.
* Remove executable permission from text files.
parent 4b8e5963
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Sampling of the BZ with k-points
================================
:author: Miguel Pruneda and Alberto Garcia
:Author: Miguel Pruneda (ICN2) and Alberto Garcia (ICMAB-CSIC).
.. sidebar:: **Have you set up the local environment?**
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......@@ -9,7 +9,7 @@ Magnetism
If not, :ref:`do that now <local_installation>` before proceeding.
:author: Daniel Sanchez-Portal and Andrei Postnikov (2010)
:Author: Daniel Sanchez-Portal and Andrei Postnikov (2010)
Initialization of different magnetic orders in a magnetic insulator
(MnO), and analysis of the results.
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Modes of vibration of the benzene molecule
==========================================
:author: Javier Junquera and Andrei Postnikov
:Author: Javier Junquera and Andrei Postnikov
.. sidebar:: **Have you set up the local environment?**
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Phonon dispersion of bulk Si
============================
:author: Javier Junquera and Andrei Postnikov
:Author: Javier Junquera and Andrei Postnikov
.. sidebar:: **Have you set up the local environment?**
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SIESTA Deployment Options
=========================
:Author: Vladimir Dikan <vdikan@icmab.es>
:Author: Vladimir Dikan <vdikan@icmab.es> (ICMAB-CSIC)
.. contents:: Table of Contents
:depth: 3
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==================
:author: Alec Wills (Stony Brook University)
:Author: Alec Wills (Stony Brook University)
This exercise will take you through various scenarios for the different
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Nudged Elastic Band (NEB) Calculations
======================================
:author: Arsalan Akhtar (ICN2)
:Author: Arsalan Akhtar (ICN2)
In these two exercises you will learn how to calculate the barriers in materials
using the so-called nudged elastic band approach (NEB).
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<https://siesta-project.org/SIESTA_MATERIAL/Docs/Tutorials/Lyon-2007/Optical.pdf>`_
for a lecture on the subject in a previous Siesta school.
:author: Daniel Sánchez Portal, CFM-CSIC, San Sebastian
:Author: Daniel Sánchez Portal (CFM-CSIC, San Sebastian)
In this exercise you will calculate the optical properties (imaginary
and real part of the dielectric function and other derived quantities)
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Spin-Orbit coupling
===================
:author: Ramón Cuadrado
:Author: Ramón Cuadrado (University of Southampton)
*Purpose:* The main goal of the next four basic examples is to give to
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Simulation of STM images
============================
:author: Jorge Pilo (ICN2)
:Author: Jorge Pilo (ICN2)
.. sidebar:: **Have you set up the local environment?**
......@@ -367,6 +367,6 @@ manual for the codes (links from
There are some articles in which the authors use the STM Tool from
SIESTA. We invite you to read:
* E. Cisternas and J.D. Correa. Chemical Physics 409 (2012) 74–78. DOI: 10.1016/j.chemphys.2012.09.021
* \E. Cisternas and J.D. Correa: *Theoretical reproduction of superstructures revealed by STM on bilayer graphene*, Chemical Physics 409, 74-78 (2012). DOI: `10.1016/j.chemphys.2012.09.021 <https://dx.doi.org/10.1016/j.chemphys.2012.09.021>`_.
* Ana Sanz-Matías, et. al., Nanoscale, 2018,10, 1680-1694. DOI: 10.1039/C7NR07395J
* Ana Sanz-Matías, *et al.*: *Computational insight into the origin of unexpected contrast in chiral markers as revealed by STM*, Nanoscale 10, 1680-1694 (2018). DOI: `10.1039/C7NR07395J <https://dx.doi.org/10.1039/C7NR07395J>`_.
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