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fvafrcu
@fvafrcu
1Running with gitlab-runner 16.11.0~pre.21.gaa21be2d (aa21be2d)
2 on blue-2.saas-linux-small-amd64.runners-manager.gitlab.com/default XxUrkriX, system ID: s_f46a988edce4
3 feature flags: FF_USE_IMPROVED_URL_MASKING:true
4 Preparing the "docker+machine" executor 00:54
5Using Docker executor with image rocker/verse:latest ...
6Pulling docker image rocker/verse:latest ...
7Using docker image sha256:36d2b6f2a7b3b24186086dae62ab7fc8df6243043a757096affa922a883223d2 for rocker/verse:latest with digest rocker/verse@sha256:9a00235f4d538cb2c9a904e2cdb77fa907c56bab448b82ef45c3384fc6983c1d ...
8 Preparing environment 00:05
9Running on runner-xxurkrix-project-37313396-concurrent-0 via runner-xxurkrix-s-l-s-amd64-1712180269-f709fb6b...
10 Getting source from Git repository 00:01
11Fetching changes with git depth set to 20...
12Initialized empty Git repository in /builds/fvafrcu/treeplotarea/.git/
13Created fresh repository.
14Checking out 00c8d641 as detached HEAD (ref is master)...
15Skipping Git submodules setup
16$ git remote set-url origin "${CI_REPOSITORY_URL}"
17 Executing "step_script" stage of the job script 08:41
18Using docker image sha256:36d2b6f2a7b3b24186086dae62ab7fc8df6243043a757096affa922a883223d2 for rocker/verse:latest with digest rocker/verse@sha256:9a00235f4d538cb2c9a904e2cdb77fa907c56bab448b82ef45c3384fc6983c1d ...
19$ if [ -e .gitlab-ci/apt-script.cl ]; then ./.gitlab-ci/apt-script.cl; fi
20Get:1 http://security.ubuntu.com/ubuntu jammy-security InRelease [110 kB]
21Get:2 http://archive.ubuntu.com/ubuntu jammy InRelease [270 kB]
22Get:3 http://security.ubuntu.com/ubuntu jammy-security/universe amd64 Packages [1,081 kB]
23Get:4 http://security.ubuntu.com/ubuntu jammy-security/restricted amd64 Packages [2,067 kB]
24Get:5 http://security.ubuntu.com/ubuntu jammy-security/main amd64 Packages [1,641 kB]
25Get:6 http://security.ubuntu.com/ubuntu jammy-security/multiverse amd64 Packages [44.6 kB]
26Get:7 http://archive.ubuntu.com/ubuntu jammy-updates InRelease [119 kB]
27Get:8 http://archive.ubuntu.com/ubuntu jammy-backports InRelease [109 kB]
28Get:9 http://archive.ubuntu.com/ubuntu jammy/universe amd64 Packages [17.5 MB]
29Get:10 http://archive.ubuntu.com/ubuntu jammy/main amd64 Packages [1,792 kB]
30Get:11 http://archive.ubuntu.com/ubuntu jammy/multiverse amd64 Packages [266 kB]
31Get:12 http://archive.ubuntu.com/ubuntu jammy/restricted amd64 Packages [164 kB]
32Get:13 http://archive.ubuntu.com/ubuntu jammy-updates/multiverse amd64 Packages [61.2 kB]
33Get:14 http://archive.ubuntu.com/ubuntu jammy-updates/universe amd64 Packages [1,358 kB]
34Get:15 http://archive.ubuntu.com/ubuntu jammy-updates/main amd64 Packages [1,920 kB]
35Get:16 http://archive.ubuntu.com/ubuntu jammy-updates/restricted amd64 Packages [2,104 kB]
36Get:17 http://archive.ubuntu.com/ubuntu jammy-backports/universe amd64 Packages [33.3 kB]
37Get:18 http://archive.ubuntu.com/ubuntu jammy-backports/main amd64 Packages [80.9 kB]
38Fetched 30.7 MB in 2s (12.5 MB/s)
39Reading package lists...
40Reading package lists...
41Building dependency tree...
42Reading state information...
43libgit2-dev is already the newest version (1.1.0+dfsg.1-4.1ubuntu0.1).
440 upgraded, 0 newly installed, 0 to remove and 9 not upgraded.
45Reading package lists...
46Building dependency tree...
47Reading state information...
48The following additional packages will be installed:
49 gdal-data hdf5-helpers libaec-dev libaec0 libaom-dev libarmadillo-dev
50 libarmadillo10 libarpack2 libarpack2-dev libblosc-dev libblosc1 libboost-dev
51 libboost1.74-dev libcfitsio-dev libcfitsio-doc libcfitsio9 libcharls-dev
52 libcharls2 libdav1d-dev libde265-dev libfreexl-dev libfreexl1 libfyba-dev
53 libfyba0 libgdal30 libgeos-c1v5 libgeos-dev libgeos3.10.2 libgeotiff-dev
54 libgeotiff5 libgif-dev libhdf4-0-alt libhdf4-alt-dev libhdf5-103-1
55 libhdf5-cpp-103-1 libhdf5-dev libhdf5-fortran-102 libhdf5-hl-100
56 libhdf5-hl-cpp-100 libhdf5-hl-fortran-100 libheif-dev libjson-c-dev
57 libjson-c5 libkml-dev libkmlbase1 libkmlconvenience1 libkmldom1
58 libkmlengine1 libkmlregionator1 libkmlxsd1 liblz4-dev libminizip-dev
59 libminizip1 libnetcdf-dev libnetcdf19 libogdi-dev libogdi4.1 libpoppler-dev
60 libpoppler-private-dev libpoppler118 libproj-dev libproj22 libqhull-dev
61 libqhull-r8.0 libqhull8.0 libqhullcpp8.0 librttopo-dev librttopo1
62 libsnappy1v5 libspatialite-dev libspatialite7 libsuperlu-dev libsuperlu5
63 libsz2 libudunits2-0 libudunits2-data liburiparser-dev liburiparser1
64 libwebp-dev libx265-dev libxerces-c-dev libxerces-c3.2 proj-bin proj-data
65Suggested packages:
66 libitpp-dev libboost-doc libboost1.74-doc libboost-atomic1.74-dev
67 libboost-chrono1.74-dev libboost-container1.74-dev libboost-context1.74-dev
68 libboost-contract1.74-dev libboost-coroutine1.74-dev
69 libboost-date-time1.74-dev libboost-exception1.74-dev libboost-fiber1.74-dev
70 libboost-filesystem1.74-dev libboost-graph1.74-dev
71 libboost-graph-parallel1.74-dev libboost-iostreams1.74-dev
72 libboost-locale1.74-dev libboost-log1.74-dev libboost-math1.74-dev
73 libboost-mpi1.74-dev libboost-mpi-python1.74-dev libboost-numpy1.74-dev
74 libboost-program-options1.74-dev libboost-python1.74-dev
75 libboost-random1.74-dev libboost-regex1.74-dev
76 libboost-serialization1.74-dev libboost-stacktrace1.74-dev
77 libboost-system1.74-dev libboost-test1.74-dev libboost-thread1.74-dev
78 libboost-timer1.74-dev libboost-type-erasure1.74-dev libboost-wave1.74-dev
79 libboost1.74-tools-dev libmpfrc++-dev libntl-dev libboost-nowide1.74-dev
80 libgdal-doc libgeotiff-epsg geotiff-bin gdal-bin libhdf4-doc hdf4-tools
81 libhdf5-doc netcdf-bin netcdf-doc ogdi-bin libsuperlu-doc libx265-doc
82 libxerces-c-doc
83The following NEW packages will be installed:
84 gdal-data hdf5-helpers libaec-dev libaec0 libaom-dev libarmadillo-dev
85 libarmadillo10 libarpack2 libarpack2-dev libblosc-dev libblosc1 libboost-dev
86 libboost1.74-dev libcfitsio-dev libcfitsio-doc libcfitsio9 libcharls-dev
87 libcharls2 libdav1d-dev libde265-dev libfreexl-dev libfreexl1 libfyba-dev
88 libfyba0 libgdal-dev libgdal30 libgeos-c1v5 libgeos-dev libgeos3.10.2
89 libgeotiff-dev libgeotiff5 libgif-dev libhdf4-0-alt libhdf4-alt-dev
90 libhdf5-103-1 libhdf5-cpp-103-1 libhdf5-dev libhdf5-fortran-102
91 libhdf5-hl-100 libhdf5-hl-cpp-100 libhdf5-hl-fortran-100 libheif-dev
92 libjson-c-dev libjson-c5 libkml-dev libkmlbase1 libkmlconvenience1
93 libkmldom1 libkmlengine1 libkmlregionator1 libkmlxsd1 liblz4-dev
94 libminizip-dev libminizip1 libnetcdf-dev libnetcdf19 libogdi-dev libogdi4.1
95 libpoppler-dev libpoppler-private-dev libpoppler118 libproj-dev libproj22
96 libqhull-dev libqhull-r8.0 libqhull8.0 libqhullcpp8.0 librttopo-dev
97 librttopo1 libsnappy1v5 libspatialite-dev libspatialite7 libsuperlu-dev
98 libsuperlu5 libsz2 libudunits2-0 libudunits2-data libudunits2-dev
99 liburiparser-dev liburiparser1 libwebp-dev libx265-dev libxerces-c-dev
100 libxerces-c3.2 proj-bin proj-data
1010 upgraded, 86 newly installed, 0 to remove and 9 not upgraded.
102Need to get 68.2 MB of archives.
103After this operation, 410 MB of additional disk space will be used.
104Get:1 http://archive.ubuntu.com/ubuntu jammy-updates/main amd64 libjson-c5 amd64 0.15-3~ubuntu1.22.04.2 [33.5 kB]
105Get:2 http://archive.ubuntu.com/ubuntu jammy/universe amd64 gdal-data all 3.4.1+dfsg-1build4 [216 kB]
106Get:3 http://archive.ubuntu.com/ubuntu jammy/universe amd64 hdf5-helpers amd64 1.10.7+repack-4ubuntu2 [14.2 kB]
107Get:4 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libaec0 amd64 1.0.6-1 [20.1 kB]
108Get:5 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libaom-dev amd64 3.3.0-1 [2,094 kB]
109Get:6 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libarpack2 amd64 3.8.0-1 [92.4 kB]
110Get:7 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libsuperlu5 amd64 5.3.0+dfsg1-2 [183 kB]
111Get:8 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libarmadillo10 amd64 1:10.8.2+dfsg-1 [105 kB]
112Get:9 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libarpack2-dev amd64 3.8.0-1 [105 kB]
113Get:10 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libsz2 amd64 1.0.6-1 [5,354 B]
114Get:11 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libhdf5-103-1 amd64 1.10.7+repack-4ubuntu2 [1,295 kB]
115Get:12 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libhdf5-fortran-102 amd64 1.10.7+repack-4ubuntu2 [90.9 kB]
116Get:13 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libhdf5-hl-100 amd64 1.10.7+repack-4ubuntu2 [59.1 kB]
117Get:14 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libhdf5-hl-fortran-100 amd64 1.10.7+repack-4ubuntu2 [33.8 kB]
118Get:15 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libhdf5-cpp-103-1 amd64 1.10.7+repack-4ubuntu2 [129 kB]
119Get:16 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libhdf5-hl-cpp-100 amd64 1.10.7+repack-4ubuntu2 [10.6 kB]
120Get:17 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libaec-dev amd64 1.0.6-1 [17.9 kB]
121Get:18 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libhdf5-dev amd64 1.10.7+repack-4ubuntu2 [2,684 kB]
122Get:19 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libsuperlu-dev amd64 5.3.0+dfsg1-2 [20.0 kB]
123Get:20 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libarmadillo-dev amd64 1:10.8.2+dfsg-1 [399 kB]
124Get:21 http://archive.ubuntu.com/ubuntu jammy/main amd64 libsnappy1v5 amd64 1.1.8-1build3 [17.5 kB]
125Get:22 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libblosc1 amd64 1.21.1+ds2-2 [35.8 kB]
126Get:23 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libblosc-dev amd64 1.21.1+ds2-2 [44.1 kB]
127Get:24 http://archive.ubuntu.com/ubuntu jammy/main amd64 libboost1.74-dev amd64 1.74.0-14ubuntu3 [9,609 kB]
128Get:25 http://archive.ubuntu.com/ubuntu jammy/main amd64 libboost-dev amd64 1.74.0.3ubuntu7 [3,490 B]
129Get:26 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libcfitsio9 amd64 4.0.0-1 [519 kB]
130Get:27 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libcfitsio-dev amd64 4.0.0-1 [591 kB]
131Get:28 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libcfitsio-doc all 4.0.0-1 [2,053 kB]
132Get:29 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libcharls2 amd64 2.3.4-1 [87.0 kB]
133Get:30 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libcharls-dev amd64 2.3.4-1 [22.4 kB]
134Get:31 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libdav1d-dev amd64 0.9.2-1 [24.1 kB]
135Get:32 http://archive.ubuntu.com/ubuntu jammy-updates/universe amd64 libde265-dev amd64 1.0.8-1ubuntu0.3 [12.3 kB]
136Get:33 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libfyba0 amd64 4.1.1-7 [113 kB]
137Get:34 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libfyba-dev amd64 4.1.1-7 [166 kB]
138Get:35 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libfreexl1 amd64 1.0.6-1 [33.5 kB]
139Get:36 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libgeos3.10.2 amd64 3.10.2-1 [713 kB]
140Get:37 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libgeos-c1v5 amd64 3.10.2-1 [82.5 kB]
141Get:38 http://archive.ubuntu.com/ubuntu jammy/universe amd64 proj-data all 8.2.1-1 [10.0 MB]
142Get:39 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libproj22 amd64 8.2.1-1 [1,257 kB]
143Get:40 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libgeotiff5 amd64 1.7.0-2build1 [67.1 kB]
144Get:41 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libhdf4-0-alt amd64 4.2.15-4 [290 kB]
145Get:42 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libminizip1 amd64 1.1-8build1 [20.2 kB]
146Get:43 http://archive.ubuntu.com/ubuntu jammy/universe amd64 liburiparser1 amd64 0.9.6+dfsg-1 [36.4 kB]
147Get:44 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libkmlbase1 amd64 1.3.0-9 [45.0 kB]
148Get:45 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libkmldom1 amd64 1.3.0-9 [150 kB]
149Get:46 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libkmlengine1 amd64 1.3.0-9 [71.7 kB]
150Get:47 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libnetcdf19 amd64 1:4.8.1-1 [456 kB]
151Get:48 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libogdi4.1 amd64 4.1.0+ds-5 [197 kB]
152Get:49 http://archive.ubuntu.com/ubuntu jammy-updates/main amd64 libpoppler118 amd64 22.02.0-2ubuntu0.3 [1,072 kB]
153Get:50 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libqhull-r8.0 amd64 2020.2-4 [196 kB]
154Get:51 http://archive.ubuntu.com/ubuntu jammy/universe amd64 librttopo1 amd64 1.1.0-2 [178 kB]
155Get:52 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libspatialite7 amd64 5.0.1-2build2 [2,092 kB]
156Get:53 http://archive.ubuntu.com/ubuntu jammy-updates/universe amd64 libxerces-c3.2 amd64 3.2.3+debian-3ubuntu0.1 [929 kB]
157Get:54 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libgdal30 amd64 3.4.1+dfsg-1build4 [7,642 kB]
158Get:55 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libgeos-dev amd64 3.10.2-1 [46.6 kB]
159Get:56 http://archive.ubuntu.com/ubuntu jammy/main amd64 libgif-dev amd64 5.1.9-2build2 [22.4 kB]
160Get:57 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libx265-dev amd64 3.5-2 [1,374 kB]
161Get:58 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libheif-dev amd64 1.12.0-2build1 [26.4 kB]
162Get:59 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libkmlconvenience1 amd64 1.3.0-9 [45.1 kB]
163Get:60 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libkmlregionator1 amd64 1.3.0-9 [19.9 kB]
164Get:61 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libkmlxsd1 amd64 1.3.0-9 [27.3 kB]
165Get:62 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libminizip-dev amd64 1.1-8build1 [26.7 kB]
166Get:63 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libnetcdf-dev amd64 1:4.8.1-1 [50.3 kB]
167Get:64 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libogdi-dev amd64 4.1.0+ds-5 [22.1 kB]
168Get:65 http://archive.ubuntu.com/ubuntu jammy-updates/main amd64 libpoppler-dev amd64 22.02.0-2ubuntu0.3 [5,182 B]
169Get:66 http://archive.ubuntu.com/ubuntu jammy-updates/main amd64 libpoppler-private-dev amd64 22.02.0-2ubuntu0.3 [199 kB]
170Get:67 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libqhull8.0 amd64 2020.2-4 [193 kB]
171Get:68 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libqhullcpp8.0 amd64 2020.2-4 [53.0 kB]
172Get:69 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libqhull-dev amd64 2020.2-4 [502 kB]
173Get:70 http://archive.ubuntu.com/ubuntu jammy/universe amd64 librttopo-dev amd64 1.1.0-2 [220 kB]
174Get:71 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libudunits2-data all 2.2.28-3 [19.0 kB]
175Get:72 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libudunits2-0 amd64 2.2.28-3 [50.3 kB]
176Get:73 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libudunits2-dev amd64 2.2.28-3 [364 kB]
177Get:74 http://archive.ubuntu.com/ubuntu jammy/universe amd64 liburiparser-dev amd64 0.9.6+dfsg-1 [12.2 kB]
178Get:75 http://archive.ubuntu.com/ubuntu jammy-updates/universe amd64 libxerces-c-dev amd64 3.2.3+debian-3ubuntu0.1 [1,820 kB]
179Get:76 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libfreexl-dev amd64 1.0.6-1 [31.4 kB]
180Get:77 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libproj-dev amd64 8.2.1-1 [1,594 kB]
181Get:78 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libgeotiff-dev amd64 1.7.0-2build1 [92.4 kB]
182Get:79 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libhdf4-alt-dev amd64 4.2.15-4 [406 kB]
183Get:80 http://archive.ubuntu.com/ubuntu jammy-updates/main amd64 libjson-c-dev amd64 0.15-3~ubuntu1.22.04.2 [60.5 kB]
184Get:81 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libkml-dev amd64 1.3.0-9 [933 kB]
185Get:82 http://archive.ubuntu.com/ubuntu jammy/main amd64 liblz4-dev amd64 1.9.3-2build2 [80.7 kB]
186Get:83 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libspatialite-dev amd64 5.0.1-2build2 [2,397 kB]
187Get:84 http://archive.ubuntu.com/ubuntu jammy-updates/main amd64 libwebp-dev amd64 1.2.2-2ubuntu0.22.04.2 [298 kB]
188Get:85 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libgdal-dev amd64 3.4.1+dfsg-1build4 [10.6 MB]
189Get:86 http://archive.ubuntu.com/ubuntu jammy/universe amd64 proj-bin amd64 8.2.1-1 [154 kB]
190debconf: delaying package configuration, since apt-utils is not installed
191Fetched 68.2 MB in 1s (72.3 MB/s)
192Selecting previously unselected package libjson-c5:amd64.
193(Reading database ... 49644 files and directories currently installed.)
194Preparing to unpack .../00-libjson-c5_0.15-3~ubuntu1.22.04.2_amd64.deb ...
195Unpacking libjson-c5:amd64 (0.15-3~ubuntu1.22.04.2) ...
196Selecting previously unselected package gdal-data.
197Preparing to unpack .../01-gdal-data_3.4.1+dfsg-1build4_all.deb ...
198Unpacking gdal-data (3.4.1+dfsg-1build4) ...
199Selecting previously unselected package hdf5-helpers.
200Preparing to unpack .../02-hdf5-helpers_1.10.7+repack-4ubuntu2_amd64.deb ...
201Unpacking hdf5-helpers (1.10.7+repack-4ubuntu2) ...
202Selecting previously unselected package libaec0:amd64.
203Preparing to unpack .../03-libaec0_1.0.6-1_amd64.deb ...
204Unpacking libaec0:amd64 (1.0.6-1) ...
205Selecting previously unselected package libaom-dev:amd64.
206Preparing to unpack .../04-libaom-dev_3.3.0-1_amd64.deb ...
207Unpacking libaom-dev:amd64 (3.3.0-1) ...
208Selecting previously unselected package libarpack2:amd64.
209Preparing to unpack .../05-libarpack2_3.8.0-1_amd64.deb ...
210Unpacking libarpack2:amd64 (3.8.0-1) ...
211Selecting previously unselected package libsuperlu5:amd64.
212Preparing to unpack .../06-libsuperlu5_5.3.0+dfsg1-2_amd64.deb ...
213Unpacking libsuperlu5:amd64 (5.3.0+dfsg1-2) ...
214Selecting previously unselected package libarmadillo10.
215Preparing to unpack .../07-libarmadillo10_1%3a10.8.2+dfsg-1_amd64.deb ...
216Unpacking libarmadillo10 (1:10.8.2+dfsg-1) ...
217Selecting previously unselected package libarpack2-dev:amd64.
218Preparing to unpack .../08-libarpack2-dev_3.8.0-1_amd64.deb ...
219Unpacking libarpack2-dev:amd64 (3.8.0-1) ...
220Selecting previously unselected package libsz2:amd64.
221Preparing to unpack .../09-libsz2_1.0.6-1_amd64.deb ...
222Unpacking libsz2:amd64 (1.0.6-1) ...
223Selecting previously unselected package libhdf5-103-1:amd64.
224Preparing to unpack .../10-libhdf5-103-1_1.10.7+repack-4ubuntu2_amd64.deb ...
225Unpacking libhdf5-103-1:amd64 (1.10.7+repack-4ubuntu2) ...
226Selecting previously unselected package libhdf5-fortran-102:amd64.
227Preparing to unpack .../11-libhdf5-fortran-102_1.10.7+repack-4ubuntu2_amd64.deb ...
228Unpacking libhdf5-fortran-102:amd64 (1.10.7+repack-4ubuntu2) ...
229Selecting previously unselected package libhdf5-hl-100:amd64.
230Preparing to unpack .../12-libhdf5-hl-100_1.10.7+repack-4ubuntu2_amd64.deb ...
231Unpacking libhdf5-hl-100:amd64 (1.10.7+repack-4ubuntu2) ...
232Selecting previously unselected package libhdf5-hl-fortran-100:amd64.
233Preparing to unpack .../13-libhdf5-hl-fortran-100_1.10.7+repack-4ubuntu2_amd64.deb ...
234Unpacking libhdf5-hl-fortran-100:amd64 (1.10.7+repack-4ubuntu2) ...
235Selecting previously unselected package libhdf5-cpp-103-1:amd64.
236Preparing to unpack .../14-libhdf5-cpp-103-1_1.10.7+repack-4ubuntu2_amd64.deb ...
237Unpacking libhdf5-cpp-103-1:amd64 (1.10.7+repack-4ubuntu2) ...
238Selecting previously unselected package libhdf5-hl-cpp-100:amd64.
239Preparing to unpack .../15-libhdf5-hl-cpp-100_1.10.7+repack-4ubuntu2_amd64.deb ...
240Unpacking libhdf5-hl-cpp-100:amd64 (1.10.7+repack-4ubuntu2) ...
241Selecting previously unselected package libaec-dev:amd64.
242Preparing to unpack .../16-libaec-dev_1.0.6-1_amd64.deb ...
243Unpacking libaec-dev:amd64 (1.0.6-1) ...
244Selecting previously unselected package libhdf5-dev.
245Preparing to unpack .../17-libhdf5-dev_1.10.7+repack-4ubuntu2_amd64.deb ...
246Unpacking libhdf5-dev (1.10.7+repack-4ubuntu2) ...
247Selecting previously unselected package libsuperlu-dev:amd64.
248Preparing to unpack .../18-libsuperlu-dev_5.3.0+dfsg1-2_amd64.deb ...
249Unpacking libsuperlu-dev:amd64 (5.3.0+dfsg1-2) ...
250Selecting previously unselected package libarmadillo-dev.
251Preparing to unpack .../19-libarmadillo-dev_1%3a10.8.2+dfsg-1_amd64.deb ...
252Unpacking libarmadillo-dev (1:10.8.2+dfsg-1) ...
253Selecting previously unselected package libsnappy1v5:amd64.
254Preparing to unpack .../20-libsnappy1v5_1.1.8-1build3_amd64.deb ...
255Unpacking libsnappy1v5:amd64 (1.1.8-1build3) ...
256Selecting previously unselected package libblosc1:amd64.
257Preparing to unpack .../21-libblosc1_1.21.1+ds2-2_amd64.deb ...
258Unpacking libblosc1:amd64 (1.21.1+ds2-2) ...
259Selecting previously unselected package libblosc-dev.
260Preparing to unpack .../22-libblosc-dev_1.21.1+ds2-2_amd64.deb ...
261Unpacking libblosc-dev (1.21.1+ds2-2) ...
262Selecting previously unselected package libboost1.74-dev:amd64.
263Preparing to unpack .../23-libboost1.74-dev_1.74.0-14ubuntu3_amd64.deb ...
264Unpacking libboost1.74-dev:amd64 (1.74.0-14ubuntu3) ...
265Selecting previously unselected package libboost-dev:amd64.
266Preparing to unpack .../24-libboost-dev_1.74.0.3ubuntu7_amd64.deb ...
267Unpacking libboost-dev:amd64 (1.74.0.3ubuntu7) ...
268Selecting previously unselected package libcfitsio9:amd64.
269Preparing to unpack .../25-libcfitsio9_4.0.0-1_amd64.deb ...
270Unpacking libcfitsio9:amd64 (4.0.0-1) ...
271Selecting previously unselected package libcfitsio-dev:amd64.
272Preparing to unpack .../26-libcfitsio-dev_4.0.0-1_amd64.deb ...
273Unpacking libcfitsio-dev:amd64 (4.0.0-1) ...
274Selecting previously unselected package libcfitsio-doc.
275Preparing to unpack .../27-libcfitsio-doc_4.0.0-1_all.deb ...
276Unpacking libcfitsio-doc (4.0.0-1) ...
277Selecting previously unselected package libcharls2:amd64.
278Preparing to unpack .../28-libcharls2_2.3.4-1_amd64.deb ...
279Unpacking libcharls2:amd64 (2.3.4-1) ...
280Selecting previously unselected package libcharls-dev:amd64.
281Preparing to unpack .../29-libcharls-dev_2.3.4-1_amd64.deb ...
282Unpacking libcharls-dev:amd64 (2.3.4-1) ...
283Selecting previously unselected package libdav1d-dev:amd64.
284Preparing to unpack .../30-libdav1d-dev_0.9.2-1_amd64.deb ...
285Unpacking libdav1d-dev:amd64 (0.9.2-1) ...
286Selecting previously unselected package libde265-dev:amd64.
287Preparing to unpack .../31-libde265-dev_1.0.8-1ubuntu0.3_amd64.deb ...
288Unpacking libde265-dev:amd64 (1.0.8-1ubuntu0.3) ...
289Selecting previously unselected package libfyba0:amd64.
290Preparing to unpack .../32-libfyba0_4.1.1-7_amd64.deb ...
291Unpacking libfyba0:amd64 (4.1.1-7) ...
292Selecting previously unselected package libfyba-dev:amd64.
293Preparing to unpack .../33-libfyba-dev_4.1.1-7_amd64.deb ...
294Unpacking libfyba-dev:amd64 (4.1.1-7) ...
295Selecting previously unselected package libfreexl1:amd64.
296Preparing to unpack .../34-libfreexl1_1.0.6-1_amd64.deb ...
297Unpacking libfreexl1:amd64 (1.0.6-1) ...
298Selecting previously unselected package libgeos3.10.2:amd64.
299Preparing to unpack .../35-libgeos3.10.2_3.10.2-1_amd64.deb ...
300Unpacking libgeos3.10.2:amd64 (3.10.2-1) ...
301Selecting previously unselected package libgeos-c1v5:amd64.
302Preparing to unpack .../36-libgeos-c1v5_3.10.2-1_amd64.deb ...
303Unpacking libgeos-c1v5:amd64 (3.10.2-1) ...
304Selecting previously unselected package proj-data.
305Preparing to unpack .../37-proj-data_8.2.1-1_all.deb ...
306Unpacking proj-data (8.2.1-1) ...
307Selecting previously unselected package libproj22:amd64.
308Preparing to unpack .../38-libproj22_8.2.1-1_amd64.deb ...
309Unpacking libproj22:amd64 (8.2.1-1) ...
310Selecting previously unselected package libgeotiff5:amd64.
311Preparing to unpack .../39-libgeotiff5_1.7.0-2build1_amd64.deb ...
312Unpacking libgeotiff5:amd64 (1.7.0-2build1) ...
313Selecting previously unselected package libhdf4-0-alt.
314Preparing to unpack .../40-libhdf4-0-alt_4.2.15-4_amd64.deb ...
315Unpacking libhdf4-0-alt (4.2.15-4) ...
316Selecting previously unselected package libminizip1:amd64.
317Preparing to unpack .../41-libminizip1_1.1-8build1_amd64.deb ...
318Unpacking libminizip1:amd64 (1.1-8build1) ...
319Selecting previously unselected package liburiparser1:amd64.
320Preparing to unpack .../42-liburiparser1_0.9.6+dfsg-1_amd64.deb ...
321Unpacking liburiparser1:amd64 (0.9.6+dfsg-1) ...
322Selecting previously unselected package libkmlbase1:amd64.
323Preparing to unpack .../43-libkmlbase1_1.3.0-9_amd64.deb ...
324Unpacking libkmlbase1:amd64 (1.3.0-9) ...
325Selecting previously unselected package libkmldom1:amd64.
326Preparing to unpack .../44-libkmldom1_1.3.0-9_amd64.deb ...
327Unpacking libkmldom1:amd64 (1.3.0-9) ...
328Selecting previously unselected package libkmlengine1:amd64.
329Preparing to unpack .../45-libkmlengine1_1.3.0-9_amd64.deb ...
330Unpacking libkmlengine1:amd64 (1.3.0-9) ...
331Selecting previously unselected package libnetcdf19:amd64.
332Preparing to unpack .../46-libnetcdf19_1%3a4.8.1-1_amd64.deb ...
333Unpacking libnetcdf19:amd64 (1:4.8.1-1) ...
334Selecting previously unselected package libogdi4.1.
335Preparing to unpack .../47-libogdi4.1_4.1.0+ds-5_amd64.deb ...
336Unpacking libogdi4.1 (4.1.0+ds-5) ...
337Selecting previously unselected package libpoppler118:amd64.
338Preparing to unpack .../48-libpoppler118_22.02.0-2ubuntu0.3_amd64.deb ...
339Unpacking libpoppler118:amd64 (22.02.0-2ubuntu0.3) ...
340Selecting previously unselected package libqhull-r8.0:amd64.
341Preparing to unpack .../49-libqhull-r8.0_2020.2-4_amd64.deb ...
342Unpacking libqhull-r8.0:amd64 (2020.2-4) ...
343Selecting previously unselected package librttopo1:amd64.
344Preparing to unpack .../50-librttopo1_1.1.0-2_amd64.deb ...
345Unpacking librttopo1:amd64 (1.1.0-2) ...
346Selecting previously unselected package libspatialite7:amd64.
347Preparing to unpack .../51-libspatialite7_5.0.1-2build2_amd64.deb ...
348Unpacking libspatialite7:amd64 (5.0.1-2build2) ...
349Selecting previously unselected package libxerces-c3.2:amd64.
350Preparing to unpack .../52-libxerces-c3.2_3.2.3+debian-3ubuntu0.1_amd64.deb ...
351Unpacking libxerces-c3.2:amd64 (3.2.3+debian-3ubuntu0.1) ...
352Selecting previously unselected package libgdal30.
353Preparing to unpack .../53-libgdal30_3.4.1+dfsg-1build4_amd64.deb ...
354Unpacking libgdal30 (3.4.1+dfsg-1build4) ...
355Selecting previously unselected package libgeos-dev.
356Preparing to unpack .../54-libgeos-dev_3.10.2-1_amd64.deb ...
357Unpacking libgeos-dev (3.10.2-1) ...
358Selecting previously unselected package libgif-dev.
359Preparing to unpack .../55-libgif-dev_5.1.9-2build2_amd64.deb ...
360Unpacking libgif-dev (5.1.9-2build2) ...
361Selecting previously unselected package libx265-dev:amd64.
362Preparing to unpack .../56-libx265-dev_3.5-2_amd64.deb ...
363Unpacking libx265-dev:amd64 (3.5-2) ...
364Selecting previously unselected package libheif-dev:amd64.
365Preparing to unpack .../57-libheif-dev_1.12.0-2build1_amd64.deb ...
366Unpacking libheif-dev:amd64 (1.12.0-2build1) ...
367Selecting previously unselected package libkmlconvenience1:amd64.
368Preparing to unpack .../58-libkmlconvenience1_1.3.0-9_amd64.deb ...
369Unpacking libkmlconvenience1:amd64 (1.3.0-9) ...
370Selecting previously unselected package libkmlregionator1:amd64.
371Preparing to unpack .../59-libkmlregionator1_1.3.0-9_amd64.deb ...
372Unpacking libkmlregionator1:amd64 (1.3.0-9) ...
373Selecting previously unselected package libkmlxsd1:amd64.
374Preparing to unpack .../60-libkmlxsd1_1.3.0-9_amd64.deb ...
375Unpacking libkmlxsd1:amd64 (1.3.0-9) ...
376Selecting previously unselected package libminizip-dev:amd64.
377Preparing to unpack .../61-libminizip-dev_1.1-8build1_amd64.deb ...
378Unpacking libminizip-dev:amd64 (1.1-8build1) ...
379Selecting previously unselected package libnetcdf-dev.
380Preparing to unpack .../62-libnetcdf-dev_1%3a4.8.1-1_amd64.deb ...
381Unpacking libnetcdf-dev (1:4.8.1-1) ...
382Selecting previously unselected package libogdi-dev.
383Preparing to unpack .../63-libogdi-dev_4.1.0+ds-5_amd64.deb ...
384Unpacking libogdi-dev (4.1.0+ds-5) ...
385Selecting previously unselected package libpoppler-dev:amd64.
386Preparing to unpack .../64-libpoppler-dev_22.02.0-2ubuntu0.3_amd64.deb ...
387Unpacking libpoppler-dev:amd64 (22.02.0-2ubuntu0.3) ...
388Selecting previously unselected package libpoppler-private-dev:amd64.
389Preparing to unpack .../65-libpoppler-private-dev_22.02.0-2ubuntu0.3_amd64.deb ...
390Unpacking libpoppler-private-dev:amd64 (22.02.0-2ubuntu0.3) ...
391Selecting previously unselected package libqhull8.0:amd64.
392Preparing to unpack .../66-libqhull8.0_2020.2-4_amd64.deb ...
393Unpacking libqhull8.0:amd64 (2020.2-4) ...
394Selecting previously unselected package libqhullcpp8.0:amd64.
395Preparing to unpack .../67-libqhullcpp8.0_2020.2-4_amd64.deb ...
396Unpacking libqhullcpp8.0:amd64 (2020.2-4) ...
397Selecting previously unselected package libqhull-dev:amd64.
398Preparing to unpack .../68-libqhull-dev_2020.2-4_amd64.deb ...
399Unpacking libqhull-dev:amd64 (2020.2-4) ...
400Selecting previously unselected package librttopo-dev:amd64.
401Preparing to unpack .../69-librttopo-dev_1.1.0-2_amd64.deb ...
402Unpacking librttopo-dev:amd64 (1.1.0-2) ...
403Selecting previously unselected package libudunits2-data.
404Preparing to unpack .../70-libudunits2-data_2.2.28-3_all.deb ...
405Unpacking libudunits2-data (2.2.28-3) ...
406Selecting previously unselected package libudunits2-0.
407Preparing to unpack .../71-libudunits2-0_2.2.28-3_amd64.deb ...
408Unpacking libudunits2-0 (2.2.28-3) ...
409Selecting previously unselected package libudunits2-dev.
410Preparing to unpack .../72-libudunits2-dev_2.2.28-3_amd64.deb ...
411Unpacking libudunits2-dev (2.2.28-3) ...
412Selecting previously unselected package liburiparser-dev.
413Preparing to unpack .../73-liburiparser-dev_0.9.6+dfsg-1_amd64.deb ...
414Unpacking liburiparser-dev (0.9.6+dfsg-1) ...
415Selecting previously unselected package libxerces-c-dev:amd64.
416Preparing to unpack .../74-libxerces-c-dev_3.2.3+debian-3ubuntu0.1_amd64.deb ...
417Unpacking libxerces-c-dev:amd64 (3.2.3+debian-3ubuntu0.1) ...
418Selecting previously unselected package libfreexl-dev:amd64.
419Preparing to unpack .../75-libfreexl-dev_1.0.6-1_amd64.deb ...
420Unpacking libfreexl-dev:amd64 (1.0.6-1) ...
421Selecting previously unselected package libproj-dev:amd64.
422Preparing to unpack .../76-libproj-dev_8.2.1-1_amd64.deb ...
423Unpacking libproj-dev:amd64 (8.2.1-1) ...
424Selecting previously unselected package libgeotiff-dev:amd64.
425Preparing to unpack .../77-libgeotiff-dev_1.7.0-2build1_amd64.deb ...
426Unpacking libgeotiff-dev:amd64 (1.7.0-2build1) ...
427Selecting previously unselected package libhdf4-alt-dev.
428Preparing to unpack .../78-libhdf4-alt-dev_4.2.15-4_amd64.deb ...
429Unpacking libhdf4-alt-dev (4.2.15-4) ...
430Selecting previously unselected package libjson-c-dev:amd64.
431Preparing to unpack .../79-libjson-c-dev_0.15-3~ubuntu1.22.04.2_amd64.deb ...
432Unpacking libjson-c-dev:amd64 (0.15-3~ubuntu1.22.04.2) ...
433Selecting previously unselected package libkml-dev:amd64.
434Preparing to unpack .../80-libkml-dev_1.3.0-9_amd64.deb ...
435Unpacking libkml-dev:amd64 (1.3.0-9) ...
436Selecting previously unselected package liblz4-dev:amd64.
437Preparing to unpack .../81-liblz4-dev_1.9.3-2build2_amd64.deb ...
438Unpacking liblz4-dev:amd64 (1.9.3-2build2) ...
439Selecting previously unselected package libspatialite-dev:amd64.
440Preparing to unpack .../82-libspatialite-dev_5.0.1-2build2_amd64.deb ...
441Unpacking libspatialite-dev:amd64 (5.0.1-2build2) ...
442Selecting previously unselected package libwebp-dev:amd64.
443Preparing to unpack .../83-libwebp-dev_1.2.2-2ubuntu0.22.04.2_amd64.deb ...
444Unpacking libwebp-dev:amd64 (1.2.2-2ubuntu0.22.04.2) ...
445Selecting previously unselected package libgdal-dev.
446Preparing to unpack .../84-libgdal-dev_3.4.1+dfsg-1build4_amd64.deb ...
447Unpacking libgdal-dev (3.4.1+dfsg-1build4) ...
448Selecting previously unselected package proj-bin.
449Preparing to unpack .../85-proj-bin_8.2.1-1_amd64.deb ...
450Unpacking proj-bin (8.2.1-1) ...
451Setting up libgeos3.10.2:amd64 (3.10.2-1) ...
452Setting up libboost1.74-dev:amd64 (1.74.0-14ubuntu3) ...
453Setting up libxerces-c3.2:amd64 (3.2.3+debian-3ubuntu0.1) ...
454Setting up proj-data (8.2.1-1) ...
455Setting up hdf5-helpers (1.10.7+repack-4ubuntu2) ...
456Setting up libogdi4.1 (4.1.0+ds-5) ...
457Setting up libqhull8.0:amd64 (2020.2-4) ...
458Setting up libcharls2:amd64 (2.3.4-1) ...
459Setting up libminizip1:amd64 (1.1-8build1) ...
460Setting up libarpack2:amd64 (3.8.0-1) ...
461Setting up libsuperlu5:amd64 (5.3.0+dfsg1-2) ...
462Setting up libqhull-r8.0:amd64 (2020.2-4) ...
463Setting up libproj22:amd64 (8.2.1-1) ...
464Setting up libaec0:amd64 (1.0.6-1) ...
465Setting up gdal-data (3.4.1+dfsg-1build4) ...
466Setting up libgeotiff5:amd64 (1.7.0-2build1) ...
467Setting up libsnappy1v5:amd64 (1.1.8-1build3) ...
468Setting up libcfitsio9:amd64 (4.0.0-1) ...
469Setting up libaom-dev:amd64 (3.3.0-1) ...
470Setting up libpoppler118:amd64 (22.02.0-2ubuntu0.3) ...
471Setting up libminizip-dev:amd64 (1.1-8build1) ...
472Setting up libwebp-dev:amd64 (1.2.2-2ubuntu0.22.04.2) ...
473Setting up libde265-dev:amd64 (1.0.8-1ubuntu0.3) ...
474Setting up libxerces-c-dev:amd64 (3.2.3+debian-3ubuntu0.1) ...
475Setting up libdav1d-dev:amd64 (0.9.2-1) ...
476Setting up libx265-dev:amd64 (3.5-2) ...
477Setting up libproj-dev:amd64 (8.2.1-1) ...
478Setting up liblz4-dev:amd64 (1.9.3-2build2) ...
479Setting up libgeos-c1v5:amd64 (3.10.2-1) ...
480Setting up libqhullcpp8.0:amd64 (2020.2-4) ...
481Setting up libqhull-dev:amd64 (2020.2-4) ...
482Setting up libhdf4-0-alt (4.2.15-4) ...
483Setting up liburiparser1:amd64 (0.9.6+dfsg-1) ...
484Setting up librttopo1:amd64 (1.1.0-2) ...
485Setting up libudunits2-data (2.2.28-3) ...
486Setting up libfreexl1:amd64 (1.0.6-1) ...
487Setting up libgif-dev (5.1.9-2build2) ...
488Setting up libfyba0:amd64 (4.1.1-7) ...
489Setting up libkmlbase1:amd64 (1.3.0-9) ...
490Setting up libblosc1:amd64 (1.21.1+ds2-2) ...
491Setting up libboost-dev:amd64 (1.74.0.3ubuntu7) ...
492Setting up libsuperlu-dev:amd64 (5.3.0+dfsg1-2) ...
493Setting up libjson-c5:amd64 (0.15-3~ubuntu1.22.04.2) ...
494Setting up libogdi-dev (4.1.0+ds-5) ...
495Setting up libcfitsio-doc (4.0.0-1) ...
496Setting up libsz2:amd64 (1.0.6-1) ...
497Setting up libkmlxsd1:amd64 (1.3.0-9) ...
498Setting up libkmldom1:amd64 (1.3.0-9) ...
499Setting up libpoppler-dev:amd64 (22.02.0-2ubuntu0.3) ...
500Setting up libspatialite7:amd64 (5.0.1-2build2) ...
501Setting up librttopo-dev:amd64 (1.1.0-2) ...
502Setting up libcharls-dev:amd64 (2.3.4-1) ...
503Setting up libudunits2-0 (2.2.28-3) ...
504Setting up libarmadillo10 (1:10.8.2+dfsg-1) ...
505Setting up libarpack2-dev:amd64 (3.8.0-1) ...
506Setting up libcfitsio-dev:amd64 (4.0.0-1) ...
507Setting up libkmlengine1:amd64 (1.3.0-9) ...
508Setting up libkmlconvenience1:amd64 (1.3.0-9) ...
509Setting up libgeotiff-dev:amd64 (1.7.0-2build1) ...
510Setting up libudunits2-dev (2.2.28-3) ...
511Setting up libblosc-dev (1.21.1+ds2-2) ...
512Setting up libjson-c-dev:amd64 (0.15-3~ubuntu1.22.04.2) ...
513Setting up libfreexl-dev:amd64 (1.0.6-1) ...
514Setting up libfyba-dev:amd64 (4.1.1-7) ...
515Setting up libpoppler-private-dev:amd64 (22.02.0-2ubuntu0.3) ...
516Setting up libaec-dev:amd64 (1.0.6-1) ...
517Setting up proj-bin (8.2.1-1) ...
518Setting up libheif-dev:amd64 (1.12.0-2build1) ...
519Setting up liburiparser-dev (0.9.6+dfsg-1) ...
520Setting up libkmlregionator1:amd64 (1.3.0-9) ...
521Setting up libgeos-dev (3.10.2-1) ...
522Setting up libspatialite-dev:amd64 (5.0.1-2build2) ...
523Setting up libhdf5-103-1:amd64 (1.10.7+repack-4ubuntu2) ...
524Setting up libhdf5-cpp-103-1:amd64 (1.10.7+repack-4ubuntu2) ...
525Setting up libhdf5-hl-100:amd64 (1.10.7+repack-4ubuntu2) ...
526Setting up libkml-dev:amd64 (1.3.0-9) ...
527Setting up libhdf5-hl-cpp-100:amd64 (1.10.7+repack-4ubuntu2) ...
528Setting up libhdf5-fortran-102:amd64 (1.10.7+repack-4ubuntu2) ...
529Setting up libnetcdf19:amd64 (1:4.8.1-1) ...
530Setting up libhdf5-hl-fortran-100:amd64 (1.10.7+repack-4ubuntu2) ...
531Setting up libgdal30 (3.4.1+dfsg-1build4) ...
532Setting up libhdf5-dev (1.10.7+repack-4ubuntu2) ...
533update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode
534Setting up libnetcdf-dev (1:4.8.1-1) ...
535Setting up libarmadillo-dev (1:10.8.2+dfsg-1) ...
536Setting up libhdf4-alt-dev (4.2.15-4) ...
537Setting up libgdal-dev (3.4.1+dfsg-1build4) ...
538Processing triggers for libc-bin (2.35-0ubuntu3.6) ...
539$ if [ -e .gitlab-ci/gitlab-com.R ]; then R < .gitlab-ci/gitlab-com.R; fi
540R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
541Copyright (C) 2024 The R Foundation for Statistical Computing
542Platform: x86_64-pc-linux-gnu (64-bit)
543R is free software and comes with ABSOLUTELY NO WARRANTY.
544You are welcome to redistribute it under certain conditions.
545Type 'license()' or 'licence()' for distribution details.
546 Natural language support but running in an English locale
547R is a collaborative project with many contributors.
548Type 'contributors()' for more information and
549'citation()' on how to cite R or R packages in publications.
550Type 'demo()' for some demos, 'help()' for on-line help, or
551'help.start()' for an HTML browser interface to help.
552Type 'q()' to quit R.
553> # check if this is gitlab.com
554> install.packages("remotes", repos = "https://cloud.r-project.org/")
555Installing package into ‘/usr/local/lib/R/site-library’
556(as ‘lib’ is unspecified)
557trying URL 'https://cloud.r-project.org/src/contrib/remotes_2.5.0.tar.gz'
558Content type 'application/x-gzip' length 164496 bytes (160 KB)
559==================================================
560downloaded 160 KB
561* installing *source* package ‘remotes’ ...
562** package ‘remotes’ successfully unpacked and MD5 sums checked
563** using staged installation
564** R
565** inst
566** byte-compile and prepare package for lazy loading
567** help
568*** installing help indices
569** building package indices
570** installing vignettes
571** testing if installed package can be loaded from temporary location
572** testing if installed package can be loaded from final location
573** testing if installed package keeps a record of temporary installation path
574* DONE (remotes)
575> remotes::install_git("https://gitlab.com/fvafrCU/fritools")
576The downloaded source packages are in
577 ‘/tmp/RtmpQOfrmD/downloaded_packages’
578Downloading git repo https://gitlab.com/fvafrCU/fritools
579'/usr/bin/git' clone --depth 1 --no-hardlinks https://gitlab.com/fvafrCU/fritools /tmp/RtmpQOfrmD/file40a50be0d70
580Cloning into '/tmp/RtmpQOfrmD/file40a50be0d70'...
581warning: redirecting to https://gitlab.com/fvafrCU/fritools.git/
582── R CMD build ─────────────────────────────────────────────────────────────────
583* checking for file ‘/tmp/RtmpQOfrmD/file40a50be0d70/DESCRIPTION’ ... OK
584* preparing ‘fritools’:
585* checking DESCRIPTION meta-information ... OK
586* checking for LF line-endings in source and make files and shell scripts
587* checking for empty or unneeded directories
588* building ‘fritools_4.3.0.9000.tar.gz’
589Installing package into ‘/usr/local/lib/R/site-library’
590(as ‘lib’ is unspecified)
591* installing *source* package ‘fritools’ ...
592** using staged installation
593** R
594** inst
595** byte-compile and prepare package for lazy loading
596** help
597*** installing help indices
598** building package indices
599** installing vignettes
600** testing if installed package can be loaded from temporary location
601** testing if installed package can be loaded from final location
602** testing if installed package keeps a record of temporary installation path
603* DONE (fritools)
604> r <- fritools::is_running_on_gitlab_com(verbose = TRUE)
605> warning(attr(r, "message"))
606> print(r)
607Warning message:
608
609[1] TRUE
610> if (!isTRUE(r)) {
611+ stop("fritools: Do not recognize gitlab.com")
612+ } else {
613+ message("Node is ", Sys.info()[["nodename"]],
614+ ", I guess this is gitlab.com.")
615+ }
616Node is runner-xxurkrix-project-37313396-concurrent-0, I guess this is gitlab.com.
617>
618$ R --vanilla -e 'install.packages("remotes", repos = "https://cloud.r-project.org/")'
619R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
620Copyright (C) 2024 The R Foundation for Statistical Computing
621Platform: x86_64-pc-linux-gnu (64-bit)
622R is free software and comes with ABSOLUTELY NO WARRANTY.
623You are welcome to redistribute it under certain conditions.
624Type 'license()' or 'licence()' for distribution details.
625 Natural language support but running in an English locale
626R is a collaborative project with many contributors.
627Type 'contributors()' for more information and
628'citation()' on how to cite R or R packages in publications.
629Type 'demo()' for some demos, 'help()' for on-line help, or
630'help.start()' for an HTML browser interface to help.
631Type 'q()' to quit R.
632> install.packages("remotes", repos = "https://cloud.r-project.org/")
633Installing package into ‘/usr/local/lib/R/site-library’
634(as ‘lib’ is unspecified)
635trying URL 'https://cloud.r-project.org/src/contrib/remotes_2.5.0.tar.gz'
636Content type 'application/x-gzip' length 164496 bytes (160 KB)
637==================================================
638downloaded 160 KB
639* installing *source* package ‘remotes’ ...
640** package ‘remotes’ successfully unpacked and MD5 sums checked
641** using staged installation
642** R
643** inst
644** byte-compile and prepare package for lazy loading
645** help
646*** installing help indices
647** building package indices
648** installing vignettes
649** testing if installed package can be loaded from temporary location
650** testing if installed package can be loaded from final location
651** testing if installed package keeps a record of temporary installation path
652* DONE (remotes)
653The downloaded source packages are in
654 ‘/tmp/RtmpmpHQoA/downloaded_packages’
655>
656>
657$ R --vanilla -e 'remotes::install_gitlab("fvafrcu/packager")'
658R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
659Copyright (C) 2024 The R Foundation for Statistical Computing
660Platform: x86_64-pc-linux-gnu (64-bit)
661R is free software and comes with ABSOLUTELY NO WARRANTY.
662You are welcome to redistribute it under certain conditions.
663Type 'license()' or 'licence()' for distribution details.
664 Natural language support but running in an English locale
665R is a collaborative project with many contributors.
666Type 'contributors()' for more information and
667'citation()' on how to cite R or R packages in publications.
668Type 'demo()' for some demos, 'help()' for on-line help, or
669'help.start()' for an HTML browser interface to help.
670Type 'q()' to quit R.
671> remotes::install_gitlab("fvafrcu/packager")
672Downloading GitLab repo fvafrcu/packager@HEAD
673from URL https://gitlab.com/api/v4/projects/7520019/repository/archive.tar.gz?sha=HEAD
674parsedate (NA -> 1.3.1 ) [CRAN]
675MakefileR (NA -> 1.0 ) [CRAN]
676tinytest (NA -> 1.4.1 ) [CRAN]
677rhub (NA -> 1.1.2 ) [CRAN]
678fakemake (NA -> 1.11.1) [CRAN]
679cyclocomp (NA -> 1.1.1 ) [CRAN]
680checkmate (NA -> 2.3.1 ) [CRAN]
681Installing 7 packages: parsedate, MakefileR, tinytest, rhub, fakemake, cyclocomp, checkmate
682Installing packages into ‘/usr/local/lib/R/site-library’
683(as ‘lib’ is unspecified)
684trying URL 'https://cloud.r-project.org/src/contrib/parsedate_1.3.1.tar.gz'
685Content type 'application/x-gzip' length 19800 bytes (19 KB)
686==================================================
687downloaded 19 KB
688trying URL 'https://cloud.r-project.org/src/contrib/MakefileR_1.0.tar.gz'
689Content type 'application/x-gzip' length 90374 bytes (88 KB)
690==================================================
691downloaded 88 KB
692trying URL 'https://cloud.r-project.org/src/contrib/tinytest_1.4.1.tar.gz'
693Content type 'application/x-gzip' length 587352 bytes (573 KB)
694==================================================
695downloaded 573 KB
696trying URL 'https://cloud.r-project.org/src/contrib/rhub_1.1.2.tar.gz'
697Content type 'application/x-gzip' length 1698549 bytes (1.6 MB)
698==================================================
699downloaded 1.6 MB
700trying URL 'https://cloud.r-project.org/src/contrib/fakemake_1.11.1.tar.gz'
701Content type 'application/x-gzip' length 154159 bytes (150 KB)
702==================================================
703downloaded 150 KB
704trying URL 'https://cloud.r-project.org/src/contrib/cyclocomp_1.1.1.tar.gz'
705Content type 'application/x-gzip' length 8584 bytes
706==================================================
707downloaded 8584 bytes
708trying URL 'https://cloud.r-project.org/src/contrib/checkmate_2.3.1.tar.gz'
709Content type 'application/x-gzip' length 225525 bytes (220 KB)
710==================================================
711downloaded 220 KB
712* installing *source* package ‘parsedate’ ...
713** package ‘parsedate’ successfully unpacked and MD5 sums checked
714** using staged installation
715** libs
716using C compiler: ‘gcc (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0’
717gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c date.c -o date.o
718gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c mingw.c -o mingw.o
719gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rdate.c -o rdate.o
720gcc -shared -L/usr/local/lib/R/lib -L/usr/local/lib -o parsedate.so date.o mingw.o rdate.o -L/usr/local/lib/R/lib -lR
721installing to /usr/local/lib/R/site-library/00LOCK-parsedate/00new/parsedate/libs
722** R
723** byte-compile and prepare package for lazy loading
724** help
725*** installing help indices
726** building package indices
727** testing if installed package can be loaded from temporary location
728** checking absolute paths in shared objects and dynamic libraries
729** testing if installed package can be loaded from final location
730** testing if installed package keeps a record of temporary installation path
731* DONE (parsedate)
732* installing *source* package ‘MakefileR’ ...
733** package ‘MakefileR’ successfully unpacked and MD5 sums checked
734** using staged installation
735** R
736** inst
737** byte-compile and prepare package for lazy loading
738** help
739*** installing help indices
740** building package indices
741** installing vignettes
742** testing if installed package can be loaded from temporary location
743** testing if installed package can be loaded from final location
744** testing if installed package keeps a record of temporary installation path
745* DONE (MakefileR)
746* installing *source* package ‘tinytest’ ...
747** package ‘tinytest’ successfully unpacked and MD5 sums checked
748** using staged installation
749** R
750** inst
751** byte-compile and prepare package for lazy loading
752** help
753*** installing help indices
754** building package indices
755** installing vignettes
756** testing if installed package can be loaded from temporary location
757** testing if installed package can be loaded from final location
758** testing if installed package keeps a record of temporary installation path
759* DONE (tinytest)
760* installing *source* package ‘cyclocomp’ ...
761** package ‘cyclocomp’ successfully unpacked and MD5 sums checked
762** using staged installation
763** R
764** byte-compile and prepare package for lazy loading
765** help
766*** installing help indices
767** building package indices
768** testing if installed package can be loaded from temporary location
769** testing if installed package can be loaded from final location
770** testing if installed package keeps a record of temporary installation path
771* DONE (cyclocomp)
772* installing *source* package ‘checkmate’ ...
773** package ‘checkmate’ successfully unpacked and MD5 sums checked
774** using staged installation
775** libs
776using C compiler: ‘gcc (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0’
777gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c all_missing.c -o all_missing.o
778gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c any_infinite.c -o any_infinite.o
779gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c any_missing.c -o any_missing.o
780gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c any_nan.c -o any_nan.o
781gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c checks.c -o checks.o
782gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c find_nchar.c -o find_nchar.o
783gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c guess_type.c -o guess_type.o
784gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c helper.c -o helper.o
785gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o
786gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c integerish.c -o integerish.o
787gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c is_sorted.c -o is_sorted.o
788gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c qassert.c -o qassert.o
789gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c which_first.c -o which_first.o
790gcc -shared -L/usr/local/lib/R/lib -L/usr/local/lib -o checkmate.so all_missing.o any_infinite.o any_missing.o any_nan.o checks.o find_nchar.o guess_type.o helper.o init.o integerish.o is_sorted.o qassert.o which_first.o -L/usr/local/lib/R/lib -lR
791installing to /usr/local/lib/R/site-library/00LOCK-checkmate/00new/checkmate/libs
792** R
793** inst
794** byte-compile and prepare package for lazy loading
795** help
796*** installing help indices
797** building package indices
798** installing vignettes
799** testing if installed package can be loaded from temporary location
800** checking absolute paths in shared objects and dynamic libraries
801** testing if installed package can be loaded from final location
802** testing if installed package keeps a record of temporary installation path
803* DONE (checkmate)
804* installing *source* package ‘rhub’ ...
805** package ‘rhub’ successfully unpacked and MD5 sums checked
806** using staged installation
807** R
808** inst
809** byte-compile and prepare package for lazy loading
810** help
811*** installing help indices
812*** copying figures
813** building package indices
814** installing vignettes
815** testing if installed package can be loaded from temporary location
816** testing if installed package can be loaded from final location
817** testing if installed package keeps a record of temporary installation path
818* DONE (rhub)
819* installing *source* package ‘fakemake’ ...
820** package ‘fakemake’ successfully unpacked and MD5 sums checked
821** using staged installation
822** R
823** inst
824** byte-compile and prepare package for lazy loading
825** help
826*** installing help indices
827** building package indices
828** installing vignettes
829** testing if installed package can be loaded from temporary location
830** testing if installed package can be loaded from final location
831** testing if installed package keeps a record of temporary installation path
832* DONE (fakemake)
833The downloaded source packages are in
834 ‘/tmp/RtmpOeUEyK/downloaded_packages’
835── R CMD build ─────────────────────────────────────────────────────────────────
836* checking for file ‘/tmp/RtmpOeUEyK/remotes50239ae114/packager-HEAD-e8a82dfba5e49e749dac553d4691498fe67ecb94/DESCRIPTION’ ... OK
837* preparing ‘packager’:
838* checking DESCRIPTION meta-information ... OK
839* checking for LF line-endings in source and make files and shell scripts
840* checking for empty or unneeded directories
841* building ‘packager_1.15.2.9000.tar.gz’
842Installing package into ‘/usr/local/lib/R/site-library’
843(as ‘lib’ is unspecified)
844* installing *source* package ‘packager’ ...
845** using staged installation
846** R
847** inst
848** byte-compile and prepare package for lazy loading
849** help
850*** installing help indices
851** building package indices
852** installing vignettes
853** testing if installed package can be loaded from temporary location
854** testing if installed package can be loaded from final location
855** testing if installed package keeps a record of temporary installation path
856* DONE (packager)
857>
858>
859$ R --vanilla -e 'packager::install_deps(path = ".", repos = "https://ftp.gwdg.de/pub/misc/cran/")'
860R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
861Copyright (C) 2024 The R Foundation for Statistical Computing
862Platform: x86_64-pc-linux-gnu (64-bit)
863R is free software and comes with ABSOLUTELY NO WARRANTY.
864You are welcome to redistribute it under certain conditions.
865Type 'license()' or 'licence()' for distribution details.
866 Natural language support but running in an English locale
867R is a collaborative project with many contributors.
868Type 'contributors()' for more information and
869'citation()' on how to cite R or R packages in publications.
870Type 'demo()' for some demos, 'help()' for on-line help, or
871'help.start()' for an HTML browser interface to help.
872Type 'q()' to quit R.
873> packager::install_deps(path = ".", repos = "https://ftp.gwdg.de/pub/misc/cran/")
874Downloading package from url: https://ftp.gwdg.de/pub/misc/cran/src/contrib/sf_1.0-16.tar.gz
875Installing 6 packages: proxy, wk, e1071, units, s2, classInt
876Installing packages into ‘/usr/local/lib/R/site-library’
877(as ‘lib’ is unspecified)
878trying URL 'https://ftp.gwdg.de/pub/misc/cran/src/contrib/proxy_0.4-27.tar.gz'
879Content type 'application/octet-stream' length 74622 bytes (72 KB)
880==================================================
881downloaded 72 KB
882trying URL 'https://ftp.gwdg.de/pub/misc/cran/src/contrib/wk_0.9.1.tar.gz'
883Content type 'application/octet-stream' length 1039442 bytes (1015 KB)
884==================================================
885downloaded 1015 KB
886trying URL 'https://ftp.gwdg.de/pub/misc/cran/src/contrib/e1071_1.7-14.tar.gz'
887Content type 'application/octet-stream' length 326383 bytes (318 KB)
888==================================================
889downloaded 318 KB
890trying URL 'https://ftp.gwdg.de/pub/misc/cran/src/contrib/units_0.8-5.tar.gz'
891Content type 'application/octet-stream' length 247974 bytes (242 KB)
892==================================================
893downloaded 242 KB
894trying URL 'https://ftp.gwdg.de/pub/misc/cran/src/contrib/s2_1.1.6.tar.gz'
895Content type 'application/octet-stream' length 2376936 bytes (2.3 MB)
896==================================================
897downloaded 2.3 MB
898trying URL 'https://ftp.gwdg.de/pub/misc/cran/src/contrib/classInt_0.4-10.tar.gz'
899Content type 'application/octet-stream' length 440271 bytes (429 KB)
900==================================================
901downloaded 429 KB
902* installing *source* package ‘proxy’ ...
903** package ‘proxy’ successfully unpacked and MD5 sums checked
904** using staged installation
905** libs
906using C compiler: ‘gcc (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0’
907gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c apply.c -o apply.o
908gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c arrayIndex.c -o arrayIndex.o
909gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c distance.c -o distance.o
910gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dll.c -o dll.o
911gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c util.c -o util.o
912gcc -shared -L/usr/local/lib/R/lib -L/usr/local/lib -o proxy.so apply.o arrayIndex.o distance.o dll.o util.o -L/usr/local/lib/R/lib -lR
913installing to /usr/local/lib/R/site-library/00LOCK-proxy/00new/proxy/libs
914** R
915** inst
916** byte-compile and prepare package for lazy loading
917** help
918*** installing help indices
919** building package indices
920** installing vignettes
921** testing if installed package can be loaded from temporary location
922** checking absolute paths in shared objects and dynamic libraries
923** testing if installed package can be loaded from final location
924** testing if installed package keeps a record of temporary installation path
925* DONE (proxy)
926* installing *source* package ‘wk’ ...
927** package ‘wk’ successfully unpacked and MD5 sums checked
928** using staged installation
929** libs
930using C compiler: ‘gcc (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0’
931using C++ compiler: ‘g++ (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0’
932gcc -I"/usr/local/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c bbox-handler.c -o bbox-handler.o
933gcc -I"/usr/local/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c count-handler.c -o count-handler.o
934gcc -I"/usr/local/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c debug-filter.c -o debug-filter.o
935gcc -I"/usr/local/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c flatten-filter.c -o flatten-filter.o
936gcc -I"/usr/local/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c handle-crc.c -o handle-crc.o
937gcc -I"/usr/local/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c handle-rct.c -o handle-rct.o
938gcc -I"/usr/local/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c handle-sfc.c -o handle-sfc.o
939gcc -I"/usr/local/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c handle-wkb.c -o handle-wkb.o
940g++ -std=gnu++17 -I"/usr/local/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c handle-wkt.cpp -o handle-wkt.o
941gcc -I"/usr/local/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c handle-xy.c -o handle-xy.o
942gcc -I"/usr/local/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c identity-filter.c -o identity-filter.o
943gcc -I"/usr/local/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o
944gcc -I"/usr/local/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c make-collection-filter.c -o make-collection-filter.o
945gcc -I"/usr/local/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c make-linestring-filter.c -o make-linestring-filter.o
946gcc -I"/usr/local/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c make-polygon-filter.c -o make-polygon-filter.o
947gcc -I"/usr/local/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c meta-handler.c -o meta-handler.o
948g++ -std=gnu++17 -I"/usr/local/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c orient-filter.cpp -o orient-filter.o
949gcc -I"/usr/local/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c problems-handler.c -o problems-handler.o
950gcc -I"/usr/local/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c sfc-writer.c -o sfc-writer.o
951gcc -I"/usr/local/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c trans-affine.c -o trans-affine.o
952gcc -I"/usr/local/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c trans-explicit.c -o trans-explicit.o
953gcc -I"/usr/local/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c trans-set.c -o trans-set.o
954gcc -I"/usr/local/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c transform.c -o transform.o
955gcc -I"/usr/local/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c vctr.c -o vctr.o
956gcc -I"/usr/local/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c vertex-filter.c -o vertex-filter.o
957gcc -I"/usr/local/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c void-handler.c -o void-handler.o
958gcc -I"/usr/local/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c wk-v1.c -o wk-v1.o
959gcc -I"/usr/local/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c wkb-writer.c -o wkb-writer.o
960g++ -std=gnu++17 -I"/usr/local/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c wkt-writer.cpp -o wkt-writer.o
961gcc -I"/usr/local/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c xy-writer.c -o xy-writer.o
962g++ -std=gnu++17 -shared -L/usr/local/lib/R/lib -L/usr/local/lib -o wk.so bbox-handler.o count-handler.o debug-filter.o flatten-filter.o handle-crc.o handle-rct.o handle-sfc.o handle-wkb.o handle-wkt.o handle-xy.o identity-filter.o init.o make-collection-filter.o make-linestring-filter.o make-polygon-filter.o meta-handler.o orient-filter.o problems-handler.o sfc-writer.o trans-affine.o trans-explicit.o trans-set.o transform.o vctr.o vertex-filter.o void-handler.o wk-v1.o wkb-writer.o wkt-writer.o xy-writer.o -L/usr/local/lib/R/lib -lR
963installing to /usr/local/lib/R/site-library/00LOCK-wk/00new/wk/libs
964** R
965** data
966*** moving datasets to lazyload DB
967** inst
968** byte-compile and prepare package for lazy loading
969** help
970*** installing help indices
971** building package indices
972** testing if installed package can be loaded from temporary location
973** checking absolute paths in shared objects and dynamic libraries
974** testing if installed package can be loaded from final location
975** testing if installed package keeps a record of temporary installation path
976* DONE (wk)
977* installing *source* package ‘units’ ...
978** package ‘units’ successfully unpacked and MD5 sums checked
979** using staged installation
980configure: units: 0.8-5
981checking whether the C++ compiler works... yes
982checking for C++ compiler default output file name... a.out
983checking for suffix of executables...
984checking whether we are cross compiling... no
985checking for suffix of object files... o
986checking whether the compiler supports GNU C++... yes
987checking whether g++ -std=gnu++17 accepts -g... yes
988checking for g++ -std=gnu++17 option to enable C++11 features... none needed
989checking for stdio.h... yes
990checking for stdlib.h... yes
991checking for string.h... yes
992checking for inttypes.h... yes
993checking for stdint.h... yes
994checking for strings.h... yes
995checking for sys/stat.h... yes
996checking for sys/types.h... yes
997checking for unistd.h... yes
998checking for _Bool... no
999checking for stdbool.h that conforms to C99... yes
1000checking for error_at_line... yes
1001checking for gcc... gcc
1002checking whether the compiler supports GNU C... yes
1003checking whether gcc accepts -g... yes
1004checking for gcc option to enable C11 features... none needed
1005checking for XML_ParserCreate in -lexpat... yes
1006checking for udunits2.h... yes
1007checking for ut_read_xml in -ludunits2... yes
1008configure: creating ./config.status
1009config.status: creating src/Makevars
1010** libs
1011using C++ compiler: ‘g++ (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0’
1012g++ -std=gnu++17 -I"/usr/local/lib/R/include" -DNDEBUG -DUDUNITS2_DIR=0 -I/usr/local/include -I'/usr/local/lib/R/site-library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c RcppExports.cpp -o RcppExports.o
1013g++ -std=gnu++17 -I"/usr/local/lib/R/include" -DNDEBUG -DUDUNITS2_DIR=0 -I/usr/local/include -I'/usr/local/lib/R/site-library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c udunits.cpp -o udunits.o
1014g++ -std=gnu++17 -shared -L/usr/local/lib/R/lib -L/usr/local/lib -o units.so RcppExports.o udunits.o -lexpat -lexpat -ludunits2 -L/usr/local/lib/R/lib -lR
1015installing to /usr/local/lib/R/site-library/00LOCK-units/00new/units/libs
1016** R
1017** demo
1018** inst
1019** byte-compile and prepare package for lazy loading
1020** help
1021*** installing help indices
1022** building package indices
1023** installing vignettes
1024** testing if installed package can be loaded from temporary location
1025** checking absolute paths in shared objects and dynamic libraries
1026** testing if installed package can be loaded from final location
1027** testing if installed package keeps a record of temporary installation path
1028* DONE (units)
1029* installing *source* package ‘e1071’ ...
1030** package ‘e1071’ successfully unpacked and MD5 sums checked
1031** using staged installation
1032** libs
1033using C compiler: ‘gcc (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0’
1034using C++ compiler: ‘g++ (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0’
1035gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c Rsvm.c -o Rsvm.o
1036gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c cmeans.c -o cmeans.o
1037gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c cshell.c -o cshell.o
1038gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c floyd.c -o floyd.o
1039gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o
1040g++ -std=gnu++17 -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c svm.cpp -o svm.o
1041g++ -std=gnu++17 -shared -L/usr/local/lib/R/lib -L/usr/local/lib -o e1071.so Rsvm.o cmeans.o cshell.o floyd.o init.o svm.o -L/usr/local/lib/R/lib -lR
1042installing to /usr/local/lib/R/site-library/00LOCK-e1071/00new/e1071/libs
1043** R
1044** inst
1045** byte-compile and prepare package for lazy loading
1046** help
1047*** installing help indices
1048** building package indices
1049** installing vignettes
1050** testing if installed package can be loaded from temporary location
1051** checking absolute paths in shared objects and dynamic libraries
1052** testing if installed package can be loaded from final location
1053** testing if installed package keeps a record of temporary installation path
1054* DONE (e1071)
1055* installing *source* package ‘s2’ ...
1056** package ‘s2’ successfully unpacked and MD5 sums checked
1057** using staged installation
1058Found pkg-config cflags and libs!
1059Testing compiler using PKG_CFLAGS=
1060Using PKG_LIBS=-l:libssl.so.3 -l:libcrypto.so.3
1061Using PKG_CFLAGS= -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN
1062** libs
1063using C compiler: ‘gcc (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0’
1064using C++ compiler: ‘g++ (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0’
1065using C++11
1066g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/base/internal/cycleclock.cc -o absl/base/internal/cycleclock.o
1067g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/base/internal/low_level_alloc.cc -o absl/base/internal/low_level_alloc.o
1068g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/base/internal/raw_logging.cc -o absl/base/internal/raw_logging.o
1069g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/base/internal/scoped_set_env.cc -o absl/base/internal/scoped_set_env.o
1070g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/base/internal/spinlock_wait.cc -o absl/base/internal/spinlock_wait.o
1071g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/base/internal/spinlock.cc -o absl/base/internal/spinlock.o
1072g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/base/internal/strerror.cc -o absl/base/internal/strerror.o
1073g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/base/internal/sysinfo.cc -o absl/base/internal/sysinfo.o
1074g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/base/internal/thread_identity.cc -o absl/base/internal/thread_identity.o
1075g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/base/internal/throw_delegate.cc -o absl/base/internal/throw_delegate.o
1076g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/base/internal/unscaledcycleclock.cc -o absl/base/internal/unscaledcycleclock.o
1077g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/base/log_severity.cc -o absl/base/log_severity.o
1078g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/container/internal/hashtablez_sampler_force_weak_definition.cc -o absl/container/internal/hashtablez_sampler_force_weak_definition.o
1079g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/container/internal/hashtablez_sampler.cc -o absl/container/internal/hashtablez_sampler.o
1080g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/container/internal/raw_hash_set.cc -o absl/container/internal/raw_hash_set.o
1081g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/debugging/failure_signal_handler.cc -o absl/debugging/failure_signal_handler.o
1082g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/debugging/internal/address_is_readable.cc -o absl/debugging/internal/address_is_readable.o
1083g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/debugging/internal/demangle.cc -o absl/debugging/internal/demangle.o
1084g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/debugging/internal/elf_mem_image.cc -o absl/debugging/internal/elf_mem_image.o
1085g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/debugging/internal/examine_stack.cc -o absl/debugging/internal/examine_stack.o
1086g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/debugging/internal/stack_consumption.cc -o absl/debugging/internal/stack_consumption.o
1087g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/debugging/internal/vdso_support.cc -o absl/debugging/internal/vdso_support.o
1088g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/debugging/leak_check.cc -o absl/debugging/leak_check.o
1089g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/debugging/stacktrace.cc -o absl/debugging/stacktrace.o
1090g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/debugging/symbolize.cc -o absl/debugging/symbolize.o
1091g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/numeric/int128.cc -o absl/numeric/int128.o
1092g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/profiling/internal/exponential_biased.cc -o absl/profiling/internal/exponential_biased.o
1093g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/profiling/internal/periodic_sampler.cc -o absl/profiling/internal/periodic_sampler.o
1094g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/strings/ascii.cc -o absl/strings/ascii.o
1095g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/strings/charconv.cc -o absl/strings/charconv.o
1096g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/strings/cord_analysis.cc -o absl/strings/cord_analysis.o
1097g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/strings/cord_buffer.cc -o absl/strings/cord_buffer.o
1098g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/strings/cord.cc -o absl/strings/cord.o
1099g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/strings/escaping.cc -o absl/strings/escaping.o
1100g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/strings/internal/charconv_bigint.cc -o absl/strings/internal/charconv_bigint.o
1101g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/strings/internal/charconv_parse.cc -o absl/strings/internal/charconv_parse.o
1102g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/strings/internal/cord_internal.cc -o absl/strings/internal/cord_internal.o
1103g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/strings/internal/cord_rep_btree_navigator.cc -o absl/strings/internal/cord_rep_btree_navigator.o
1104g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/strings/internal/cord_rep_btree_reader.cc -o absl/strings/internal/cord_rep_btree_reader.o
1105g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/strings/internal/cord_rep_btree.cc -o absl/strings/internal/cord_rep_btree.o
1106g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/strings/internal/cord_rep_consume.cc -o absl/strings/internal/cord_rep_consume.o
1107g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/strings/internal/cord_rep_crc.cc -o absl/strings/internal/cord_rep_crc.o
1108g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/strings/internal/cord_rep_ring.cc -o absl/strings/internal/cord_rep_ring.o
1109g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/strings/internal/cordz_functions.cc -o absl/strings/internal/cordz_functions.o
1110g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/strings/internal/cordz_handle.cc -o absl/strings/internal/cordz_handle.o
1111g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/strings/internal/cordz_info.cc -o absl/strings/internal/cordz_info.o
1112g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/strings/internal/cordz_sample_token.cc -o absl/strings/internal/cordz_sample_token.o
1113g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/strings/internal/escaping.cc -o absl/strings/internal/escaping.o
1114g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/strings/internal/memutil.cc -o absl/strings/internal/memutil.o
1115g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/strings/internal/ostringstream.cc -o absl/strings/internal/ostringstream.o
1116g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/strings/internal/pow10_helper.cc -o absl/strings/internal/pow10_helper.o
1117g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/strings/internal/str_format/arg.cc -o absl/strings/internal/str_format/arg.o
1118g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/strings/internal/str_format/bind.cc -o absl/strings/internal/str_format/bind.o
1119g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/strings/internal/str_format/extension.cc -o absl/strings/internal/str_format/extension.o
1120g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/strings/internal/str_format/float_conversion.cc -o absl/strings/internal/str_format/float_conversion.o
1121g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/strings/internal/str_format/output.cc -o absl/strings/internal/str_format/output.o
1122g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/strings/internal/str_format/parser.cc -o absl/strings/internal/str_format/parser.o
1123g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/strings/internal/utf8.cc -o absl/strings/internal/utf8.o
1124g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/strings/match.cc -o absl/strings/match.o
1125g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/strings/numbers.cc -o absl/strings/numbers.o
1126g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/strings/str_cat.cc -o absl/strings/str_cat.o
1127g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/strings/str_replace.cc -o absl/strings/str_replace.o
1128g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/strings/str_split.cc -o absl/strings/str_split.o
1129g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/strings/string_view.cc -o absl/strings/string_view.o
1130g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/strings/substitute.cc -o absl/strings/substitute.o
1131g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/synchronization/barrier.cc -o absl/synchronization/barrier.o
1132g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/synchronization/blocking_counter.cc -o absl/synchronization/blocking_counter.o
1133g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/synchronization/internal/create_thread_identity.cc -o absl/synchronization/internal/create_thread_identity.o
1134g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/synchronization/internal/graphcycles.cc -o absl/synchronization/internal/graphcycles.o
1135g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/synchronization/internal/per_thread_sem.cc -o absl/synchronization/internal/per_thread_sem.o
1136g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/synchronization/internal/waiter.cc -o absl/synchronization/internal/waiter.o
1137g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/synchronization/mutex.cc -o absl/synchronization/mutex.o
1138g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/synchronization/notification.cc -o absl/synchronization/notification.o
1139g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/time/civil_time.cc -o absl/time/civil_time.o
1140g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/time/clock.cc -o absl/time/clock.o
1141g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/time/duration.cc -o absl/time/duration.o
1142g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/time/format.cc -o absl/time/format.o
1143g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/time/internal/cctz/src/civil_time_detail.cc -o absl/time/internal/cctz/src/civil_time_detail.o
1144g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/time/internal/cctz/src/time_zone_fixed.cc -o absl/time/internal/cctz/src/time_zone_fixed.o
1145g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/time/internal/cctz/src/time_zone_format.cc -o absl/time/internal/cctz/src/time_zone_format.o
1146g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/time/internal/cctz/src/time_zone_if.cc -o absl/time/internal/cctz/src/time_zone_if.o
1147g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/time/internal/cctz/src/time_zone_impl.cc -o absl/time/internal/cctz/src/time_zone_impl.o
1148g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/time/internal/cctz/src/time_zone_info.cc -o absl/time/internal/cctz/src/time_zone_info.o
1149g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/time/internal/cctz/src/time_zone_libc.cc -o absl/time/internal/cctz/src/time_zone_libc.o
1150g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/time/internal/cctz/src/time_zone_lookup.cc -o absl/time/internal/cctz/src/time_zone_lookup.o
1151g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/time/internal/cctz/src/time_zone_posix.cc -o absl/time/internal/cctz/src/time_zone_posix.o
1152g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/time/internal/cctz/src/zone_info_source.cc -o absl/time/internal/cctz/src/zone_info_source.o
1153g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/time/time.cc -o absl/time/time.o
1154g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/types/bad_any_cast.cc -o absl/types/bad_any_cast.o
1155g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/types/bad_optional_access.cc -o absl/types/bad_optional_access.o
1156g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c absl/types/bad_variant_access.cc -o absl/types/bad_variant_access.o
1157g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c cpp-compat.cpp -o cpp-compat.o
1158g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2-accessors.cpp -o s2-accessors.o
1159g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2-bounds.cpp -o s2-bounds.o
1160g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2-cell.cpp -o s2-cell.o
1161g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2-cell-union.cpp -o s2-cell-union.o
1162g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2-constructors-formatters.cpp -o s2-constructors-formatters.o
1163g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2-predicates.cpp -o s2-predicates.o
1164g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2-transformers.cpp -o s2-transformers.o
1165g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.cpp -o init.o
1166g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c RcppExports.cpp -o RcppExports.o
1167g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2-geography.cpp -o s2-geography.o
1168g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2-lnglat.cpp -o s2-lnglat.o
1169g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2-matrix.cpp -o s2-matrix.o
1170gcc -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c wk-impl.c -o wk-impl.o
1171g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2geography/accessors.cc -o s2geography/accessors.o
1172g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2geography/accessors-geog.cc -o s2geography/accessors-geog.o
1173g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2geography/linear-referencing.cc -o s2geography/linear-referencing.o
1174g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2geography/distance.cc -o s2geography/distance.o
1175g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2geography/build.cc -o s2geography/build.o
1176g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2geography/coverings.cc -o s2geography/coverings.o
1177g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2geography/geography.cc -o s2geography/geography.o
1178g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2geography/predicates.cc -o s2geography/predicates.o
1179g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/base/stringprintf.cc -o s2/base/stringprintf.o
1180g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/base/strtoint.cc -o s2/base/strtoint.o
1181g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/encoded_s2cell_id_vector.cc -o s2/encoded_s2cell_id_vector.o
1182g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/encoded_s2point_vector.cc -o s2/encoded_s2point_vector.o
1183g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/encoded_s2shape_index.cc -o s2/encoded_s2shape_index.o
1184g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/encoded_string_vector.cc -o s2/encoded_string_vector.o
1185g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/id_set_lexicon.cc -o s2/id_set_lexicon.o
1186g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/mutable_s2shape_index.cc -o s2/mutable_s2shape_index.o
1187g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/r2rect.cc -o s2/r2rect.o
1188g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s1angle.cc -o s2/s1angle.o
1189g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s1chord_angle.cc -o s2/s1chord_angle.o
1190g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s1interval.cc -o s2/s1interval.o
1191g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2boolean_operation.cc -o s2/s2boolean_operation.o
1192g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2builder_graph.cc -o s2/s2builder_graph.o
1193g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2builder.cc -o s2/s2builder.o
1194g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2builderutil_closed_set_normalizer.cc -o s2/s2builderutil_closed_set_normalizer.o
1195g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2builderutil_find_polygon_degeneracies.cc -o s2/s2builderutil_find_polygon_degeneracies.o
1196g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2builderutil_lax_polygon_layer.cc -o s2/s2builderutil_lax_polygon_layer.o
1197g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2builderutil_s2point_vector_layer.cc -o s2/s2builderutil_s2point_vector_layer.o
1198g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2builderutil_s2polygon_layer.cc -o s2/s2builderutil_s2polygon_layer.o
1199g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2builderutil_s2polyline_layer.cc -o s2/s2builderutil_s2polyline_layer.o
1200g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2builderutil_s2polyline_vector_layer.cc -o s2/s2builderutil_s2polyline_vector_layer.o
1201g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2builderutil_snap_functions.cc -o s2/s2builderutil_snap_functions.o
1202g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2builderutil_testing.cc -o s2/s2builderutil_testing.o
1203g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2cap.cc -o s2/s2cap.o
1204g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2cell_id.cc -o s2/s2cell_id.o
1205g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2cell_index.cc -o s2/s2cell_index.o
1206g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2cell_union.cc -o s2/s2cell_union.o
1207g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2cell.cc -o s2/s2cell.o
1208g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2centroids.cc -o s2/s2centroids.o
1209g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2closest_cell_query.cc -o s2/s2closest_cell_query.o
1210g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2closest_edge_query.cc -o s2/s2closest_edge_query.o
1211g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2closest_point_query.cc -o s2/s2closest_point_query.o
1212g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2contains_vertex_query.cc -o s2/s2contains_vertex_query.o
1213g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2convex_hull_query.cc -o s2/s2convex_hull_query.o
1214g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2coords.cc -o s2/s2coords.o
1215g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2crossing_edge_query.cc -o s2/s2crossing_edge_query.o
1216g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2debug.cc -o s2/s2debug.o
1217g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2earth.cc -o s2/s2earth.o
1218g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2edge_clipping.cc -o s2/s2edge_clipping.o
1219g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2edge_crosser.cc -o s2/s2edge_crosser.o
1220g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2edge_crossings.cc -o s2/s2edge_crossings.o
1221g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2edge_distances.cc -o s2/s2edge_distances.o
1222g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2edge_tessellator.cc -o s2/s2edge_tessellator.o
1223g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2error.cc -o s2/s2error.o
1224g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2furthest_edge_query.cc -o s2/s2furthest_edge_query.o
1225g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2latlng_rect_bounder.cc -o s2/s2latlng_rect_bounder.o
1226g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2latlng_rect.cc -o s2/s2latlng_rect.o
1227g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2latlng.cc -o s2/s2latlng.o
1228g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2lax_loop_shape.cc -o s2/s2lax_loop_shape.o
1229g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2lax_polygon_shape.cc -o s2/s2lax_polygon_shape.o
1230g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2lax_polyline_shape.cc -o s2/s2lax_polyline_shape.o
1231g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2loop_measures.cc -o s2/s2loop_measures.o
1232g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2loop.cc -o s2/s2loop.o
1233g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2max_distance_targets.cc -o s2/s2max_distance_targets.o
1234g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2measures.cc -o s2/s2measures.o
1235g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2metrics.cc -o s2/s2metrics.o
1236g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2min_distance_targets.cc -o s2/s2min_distance_targets.o
1237g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2padded_cell.cc -o s2/s2padded_cell.o
1238g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2point_compression.cc -o s2/s2point_compression.o
1239g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2point_region.cc -o s2/s2point_region.o
1240g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2pointutil.cc -o s2/s2pointutil.o
1241g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2polygon.cc -o s2/s2polygon.o
1242g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2polyline_alignment.cc -o s2/s2polyline_alignment.o
1243g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2polyline_measures.cc -o s2/s2polyline_measures.o
1244g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2polyline_simplifier.cc -o s2/s2polyline_simplifier.o
1245g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2polyline.cc -o s2/s2polyline.o
1246g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2predicates.cc -o s2/s2predicates.o
1247g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2projections.cc -o s2/s2projections.o
1248g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2r2rect.cc -o s2/s2r2rect.o
1249g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2region_coverer.cc -o s2/s2region_coverer.o
1250g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2region_intersection.cc -o s2/s2region_intersection.o
1251g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2region_term_indexer.cc -o s2/s2region_term_indexer.o
1252g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2region_union.cc -o s2/s2region_union.o
1253g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2region.cc -o s2/s2region.o
1254g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2shape_index_buffered_region.cc -o s2/s2shape_index_buffered_region.o
1255g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2shape_index_measures.cc -o s2/s2shape_index_measures.o
1256g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2shape_index.cc -o s2/s2shape_index.o
1257g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2shape_measures.cc -o s2/s2shape_measures.o
1258g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2shapeutil_build_polygon_boundaries.cc -o s2/s2shapeutil_build_polygon_boundaries.o
1259g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2shapeutil_coding.cc -o s2/s2shapeutil_coding.o
1260g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2shapeutil_contains_brute_force.cc -o s2/s2shapeutil_contains_brute_force.o
1261g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2shapeutil_edge_iterator.cc -o s2/s2shapeutil_edge_iterator.o
1262g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2shapeutil_get_reference_point.cc -o s2/s2shapeutil_get_reference_point.o
1263g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2shapeutil_range_iterator.cc -o s2/s2shapeutil_range_iterator.o
1264g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2shapeutil_visit_crossing_edge_pairs.cc -o s2/s2shapeutil_visit_crossing_edge_pairs.o
1265g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2testing.cc -o s2/s2testing.o
1266g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2text_format.cc -o s2/s2text_format.o
1267g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/s2wedge_relations.cc -o s2/s2wedge_relations.o
1268g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/strings/ostringstream.cc -o s2/strings/ostringstream.o
1269g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/strings/serialize.cc -o s2/strings/serialize.o
1270g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/util/bits/bit-interleave.cc -o s2/util/bits/bit-interleave.o
1271g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/util/bits/bits.cc -o s2/util/bits/bits.o
1272g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/util/coding/coder.cc -o s2/util/coding/coder.o
1273g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/util/coding/varint.cc -o s2/util/coding/varint.o
1274g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/util/math/exactfloat/exactfloat.cc -o s2/util/math/exactfloat/exactfloat.o
1275g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/util/math/mathutil.cc -o s2/util/math/mathutil.o
1276g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I../src -DSTRICT_R_HEADERS -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/wk/include' -I/usr/local/include -DOPENSSL_SUPPRESS_DEPRECATED -DIS_LITTLE_ENDIAN -pthread -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c s2/util/units/length-units.cc -o s2/util/units/length-units.o
1277g++ -std=gnu++11 -shared -L/usr/local/lib/R/lib -L/usr/local/lib -o s2.so absl/base/internal/cycleclock.o absl/base/internal/low_level_alloc.o absl/base/internal/raw_logging.o absl/base/internal/scoped_set_env.o absl/base/internal/spinlock_wait.o absl/base/internal/spinlock.o absl/base/internal/strerror.o absl/base/internal/sysinfo.o absl/base/internal/thread_identity.o absl/base/internal/throw_delegate.o absl/base/internal/unscaledcycleclock.o absl/base/log_severity.o absl/container/internal/hashtablez_sampler_force_weak_definition.o absl/container/internal/hashtablez_sampler.o absl/container/internal/raw_hash_set.o absl/debugging/failure_signal_handler.o absl/debugging/internal/address_is_readable.o absl/debugging/internal/demangle.o absl/debugging/internal/elf_mem_image.o absl/debugging/internal/examine_stack.o absl/debugging/internal/stack_consumption.o absl/debugging/internal/vdso_support.o absl/debugging/leak_check.o absl/debugging/stacktrace.o absl/debugging/symbolize.o absl/numeric/int128.o absl/profiling/internal/exponential_biased.o absl/profiling/internal/periodic_sampler.o absl/strings/ascii.o absl/strings/charconv.o absl/strings/cord_analysis.o absl/strings/cord_buffer.o absl/strings/cord.o absl/strings/escaping.o absl/strings/internal/charconv_bigint.o absl/strings/internal/charconv_parse.o absl/strings/internal/cord_internal.o absl/strings/internal/cord_rep_btree_navigator.o absl/strings/internal/cord_rep_btree_reader.o absl/strings/internal/cord_rep_btree.o absl/strings/internal/cord_rep_consume.o absl/strings/internal/cord_rep_crc.o absl/strings/internal/cord_rep_ring.o absl/strings/internal/cordz_functions.o absl/strings/internal/cordz_handle.o absl/strings/internal/cordz_info.o absl/strings/internal/cordz_sample_token.o absl/strings/internal/escaping.o absl/strings/internal/memutil.o absl/strings/internal/ostringstream.o absl/strings/internal/pow10_helper.o absl/strings/internal/str_format/arg.o absl/strings/internal/str_format/bind.o absl/strings/internal/str_format/extension.o absl/strings/internal/str_format/float_conversion.o absl/strings/internal/str_format/output.o absl/strings/internal/str_format/parser.o absl/strings/internal/utf8.o absl/strings/match.o absl/strings/numbers.o absl/strings/str_cat.o absl/strings/str_replace.o absl/strings/str_split.o absl/strings/string_view.o absl/strings/substitute.o absl/synchronization/barrier.o absl/synchronization/blocking_counter.o absl/synchronization/internal/create_thread_identity.o absl/synchronization/internal/graphcycles.o absl/synchronization/internal/per_thread_sem.o absl/synchronization/internal/waiter.o absl/synchronization/mutex.o absl/synchronization/notification.o absl/time/civil_time.o absl/time/clock.o absl/time/duration.o absl/time/format.o absl/time/internal/cctz/src/civil_time_detail.o absl/time/internal/cctz/src/time_zone_fixed.o absl/time/internal/cctz/src/time_zone_format.o absl/time/internal/cctz/src/time_zone_if.o absl/time/internal/cctz/src/time_zone_impl.o absl/time/internal/cctz/src/time_zone_info.o absl/time/internal/cctz/src/time_zone_libc.o absl/time/internal/cctz/src/time_zone_lookup.o absl/time/internal/cctz/src/time_zone_posix.o absl/time/internal/cctz/src/zone_info_source.o absl/time/time.o absl/types/bad_any_cast.o absl/types/bad_optional_access.o absl/types/bad_variant_access.o cpp-compat.o s2-accessors.o s2-bounds.o s2-cell.o s2-cell-union.o s2-constructors-formatters.o s2-predicates.o s2-transformers.o init.o RcppExports.o s2-geography.o s2-lnglat.o s2-matrix.o wk-impl.o s2geography/accessors.o s2geography/accessors-geog.o s2geography/linear-referencing.o s2geography/distance.o s2geography/build.o s2geography/coverings.o s2geography/geography.o s2geography/predicates.o s2/base/stringprintf.o s2/base/strtoint.o s2/encoded_s2cell_id_vector.o s2/encoded_s2point_vector.o s2/encoded_s2shape_index.o s2/encoded_string_vector.o s2/id_set_lexicon.o s2/mutable_s2shape_index.o s2/r2rect.o s2/s1angle.o s2/s1chord_angle.o s2/s1interval.o s2/s2boolean_operation.o s2/s2builder_graph.o s2/s2builder.o s2/s2builderutil_closed_set_normalizer.o s2/s2builderutil_find_polygon_degeneracies.o s2/s2builderutil_lax_polygon_layer.o s2/s2builderutil_s2point_vector_layer.o s2/s2builderutil_s2polygon_layer.o s2/s2builderutil_s2polyline_layer.o s2/s2builderutil_s2polyline_vector_layer.o s2/s2builderutil_snap_functions.o s2/s2builderutil_testing.o s2/s2cap.o s2/s2cell_id.o s2/s2cell_index.o s2/s2cell_union.o s2/s2cell.o s2/s2centroids.o s2/s2closest_cell_query.o s2/s2closest_edge_query.o s2/s2closest_point_query.o s2/s2contains_vertex_query.o s2/s2convex_hull_query.o s2/s2coords.o s2/s2crossing_edge_query.o s2/s2debug.o s2/s2earth.o s2/s2edge_clipping.o s2/s2edge_crosser.o s2/s2edge_crossings.o s2/s2edge_distances.o s2/s2edge_tessellator.o s2/s2error.o s2/s2furthest_edge_query.o s2/s2latlng_rect_bounder.o s2/s2latlng_rect.o s2/s2latlng.o s2/s2lax_loop_shape.o s2/s2lax_polygon_shape.o s2/s2lax_polyline_shape.o s2/s2loop_measures.o s2/s2loop.o s2/s2max_distance_targets.o s2/s2measures.o s2/s2metrics.o s2/s2min_distance_targets.o s2/s2padded_cell.o s2/s2point_compression.o s2/s2point_region.o s2/s2pointutil.o s2/s2polygon.o s2/s2polyline_alignment.o s2/s2polyline_measures.o s2/s2polyline_simplifier.o s2/s2polyline.o s2/s2predicates.o s2/s2projections.o s2/s2r2rect.o s2/s2region_coverer.o s2/s2region_intersection.o s2/s2region_term_indexer.o s2/s2region_union.o s2/s2region.o s2/s2shape_index_buffered_region.o s2/s2shape_index_measures.o s2/s2shape_index.o s2/s2shape_measures.o s2/s2shapeutil_build_polygon_boundaries.o s2/s2shapeutil_coding.o s2/s2shapeutil_contains_brute_force.o s2/s2shapeutil_edge_iterator.o s2/s2shapeutil_get_reference_point.o s2/s2shapeutil_range_iterator.o s2/s2shapeutil_visit_crossing_edge_pairs.o s2/s2testing.o s2/s2text_format.o s2/s2wedge_relations.o s2/strings/ostringstream.o s2/strings/serialize.o s2/util/bits/bit-interleave.o s2/util/bits/bits.o s2/util/coding/coder.o s2/util/coding/varint.o s2/util/math/exactfloat/exactfloat.o s2/util/math/mathutil.o s2/util/units/length-units.o -l:libssl.so.3 -l:libcrypto.so.3 -L/usr/local/lib/R/lib -lR
1278installing to /usr/local/lib/R/site-library/00LOCK-s2/00new/s2/libs
1279** R
1280** data
1281*** moving datasets to lazyload DB
1282** inst
1283** byte-compile and prepare package for lazy loading
1284** help
1285*** installing help indices
1286*** copying figures
1287** building package indices
1288** testing if installed package can be loaded from temporary location
1289** checking absolute paths in shared objects and dynamic libraries
1290** testing if installed package can be loaded from final location
1291** testing if installed package keeps a record of temporary installation path
1292* DONE (s2)
1293* installing *source* package ‘classInt’ ...
1294** package ‘classInt’ successfully unpacked and MD5 sums checked
1295** using staged installation
1296** libs
1297using C compiler: ‘gcc (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0’
1298using Fortran compiler: ‘GNU Fortran (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0’
1299gfortran -fpic -g -O2 -c fish1.f -o fish1.o
1300gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o
1301gcc -shared -L/usr/local/lib/R/lib -L/usr/local/lib -o classInt.so fish1.o init.o -lgfortran -lm -lquadmath -L/usr/local/lib/R/lib -lR
1302installing to /usr/local/lib/R/site-library/00LOCK-classInt/00new/classInt/libs
1303** R
1304** inst
1305** byte-compile and prepare package for lazy loading
1306** help
1307*** installing help indices
1308** building package indices
1309** installing vignettes
1310** testing if installed package can be loaded from temporary location
1311** checking absolute paths in shared objects and dynamic libraries
1312** testing if installed package can be loaded from final location
1313** testing if installed package keeps a record of temporary installation path
1314* DONE (classInt)
1315The downloaded source packages are in
1316 ‘/tmp/RtmpmlzYA3/downloaded_packages’
1317Installing package into ‘/usr/local/lib/R/site-library’
1318(as ‘lib’ is unspecified)
1319* installing *source* package ‘sf’ ...
1320** package ‘sf’ successfully unpacked and MD5 sums checked
1321** using staged installation
1322configure: CC: gcc
1323configure: CXX: g++ -std=gnu++17
1324checking for gdal-config... /usr/bin/gdal-config
1325checking gdal-config usability... yes
1326configure: GDAL: 3.4.1
1327checking GDAL version >= 2.0.1... yes
1328checking for gcc... gcc
1329checking whether the C compiler works... yes
1330checking for C compiler default output file name... a.out
1331checking for suffix of executables...
1332checking whether we are cross compiling... no
1333checking for suffix of object files... o
1334checking whether the compiler supports GNU C... yes
1335checking whether gcc accepts -g... yes
1336checking for gcc option to enable C11 features... none needed
1337checking for stdio.h... yes
1338checking for stdlib.h... yes
1339checking for string.h... yes
1340checking for inttypes.h... yes
1341checking for stdint.h... yes
1342checking for strings.h... yes
1343checking for sys/stat.h... yes
1344checking for sys/types.h... yes
1345checking for unistd.h... yes
1346checking for gdal.h... yes
1347checking GDAL: linking with --libs only... yes
1348checking GDAL: /usr/share/gdal/pcs.csv readable... no
1349checking GDAL: checking whether PROJ is available for linking:... yes
1350checking GDAL: checking whether PROJ is available for running:... yes
1351configure: GDAL: 3.4.1
1352configure: pkg-config proj exists, will use it
1353configure: using proj.h.
1354configure: PROJ: 8.2.1
1355checking PROJ: checking whether PROJ and sqlite3 are available for linking:... yes
1356checking for geos-config... /usr/bin/geos-config
1357checking geos-config usability... yes
1358configure: GEOS: 3.10.2
1359checking GEOS version >= 3.4.0... yes
1360checking for geos_c.h... yes
1361checking geos: linking with -L/usr/lib/x86_64-linux-gnu -lgeos_c... yes
1362configure: Package CPP flags: -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include
1363configure: Package LIBS: -lproj -L/usr/lib -lgdal -L/usr/lib/x86_64-linux-gnu -lgeos_c
1364configure: creating ./config.status
1365config.status: creating src/Makevars
1366** libs
1367using C++ compiler: ‘g++ (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0’
1368g++ -std=gnu++17 -I"/usr/local/lib/R/include" -DNDEBUG -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -I'/usr/local/lib/R/site-library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c RcppExports.cpp -o RcppExports.o
1369g++ -std=gnu++17 -I"/usr/local/lib/R/include" -DNDEBUG -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -I'/usr/local/lib/R/site-library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c bbox.cpp -o bbox.o
1370g++ -std=gnu++17 -I"/usr/local/lib/R/include" -DNDEBUG -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -I'/usr/local/lib/R/site-library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c gdal.cpp -o gdal.o
1371g++ -std=gnu++17 -I"/usr/local/lib/R/include" -DNDEBUG -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -I'/usr/local/lib/R/site-library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c gdal_geom.cpp -o gdal_geom.o
1372g++ -std=gnu++17 -I"/usr/local/lib/R/include" -DNDEBUG -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -I'/usr/local/lib/R/site-library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c gdal_read.cpp -o gdal_read.o
1373g++ -std=gnu++17 -I"/usr/local/lib/R/include" -DNDEBUG -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -I'/usr/local/lib/R/site-library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c gdal_read_stream.cpp -o gdal_read_stream.o
1374g++ -std=gnu++17 -I"/usr/local/lib/R/include" -DNDEBUG -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -I'/usr/local/lib/R/site-library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c gdal_utils.cpp -o gdal_utils.o
1375g++ -std=gnu++17 -I"/usr/local/lib/R/include" -DNDEBUG -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -I'/usr/local/lib/R/site-library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c gdal_write.cpp -o gdal_write.o
1376g++ -std=gnu++17 -I"/usr/local/lib/R/include" -DNDEBUG -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -I'/usr/local/lib/R/site-library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c geos.cpp -o geos.o
1377g++ -std=gnu++17 -I"/usr/local/lib/R/include" -DNDEBUG -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -I'/usr/local/lib/R/site-library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c hex.cpp -o hex.o
1378g++ -std=gnu++17 -I"/usr/local/lib/R/include" -DNDEBUG -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -I'/usr/local/lib/R/site-library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c mdim.cpp -o mdim.o
1379g++ -std=gnu++17 -I"/usr/local/lib/R/include" -DNDEBUG -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -I'/usr/local/lib/R/site-library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c ops.cpp -o ops.o
1380g++ -std=gnu++17 -I"/usr/local/lib/R/include" -DNDEBUG -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -I'/usr/local/lib/R/site-library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c polygonize.cpp -o polygonize.o
1381g++ -std=gnu++17 -I"/usr/local/lib/R/include" -DNDEBUG -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -I'/usr/local/lib/R/site-library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c proj.cpp -o proj.o
1382g++ -std=gnu++17 -I"/usr/local/lib/R/include" -DNDEBUG -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -I'/usr/local/lib/R/site-library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c proj_info.cpp -o proj_info.o
1383g++ -std=gnu++17 -I"/usr/local/lib/R/include" -DNDEBUG -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -I'/usr/local/lib/R/site-library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c raster2sf.cpp -o raster2sf.o
1384g++ -std=gnu++17 -I"/usr/local/lib/R/include" -DNDEBUG -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -I'/usr/local/lib/R/site-library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c sfc-sfg.cpp -o sfc-sfg.o
1385g++ -std=gnu++17 -I"/usr/local/lib/R/include" -DNDEBUG -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -I'/usr/local/lib/R/site-library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c signed_area.cpp -o signed_area.o
1386g++ -std=gnu++17 -I"/usr/local/lib/R/include" -DNDEBUG -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -I'/usr/local/lib/R/site-library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c stars.cpp -o stars.o
1387g++ -std=gnu++17 -I"/usr/local/lib/R/include" -DNDEBUG -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -I'/usr/local/lib/R/site-library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c wkb.cpp -o wkb.o
1388g++ -std=gnu++17 -I"/usr/local/lib/R/include" -DNDEBUG -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -I'/usr/local/lib/R/site-library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c zm_range.cpp -o zm_range.o
1389g++ -std=gnu++17 -shared -L/usr/local/lib/R/lib -L/usr/local/lib -o sf.so RcppExports.o bbox.o gdal.o gdal_geom.o gdal_read.o gdal_read_stream.o gdal_utils.o gdal_write.o geos.o hex.o mdim.o ops.o polygonize.o proj.o proj_info.o raster2sf.o sfc-sfg.o signed_area.o stars.o wkb.o zm_range.o -lproj -L/usr/lib -lgdal -L/usr/lib/x86_64-linux-gnu -lgeos_c -L/usr/local/lib/R/lib -lR
1390installing to /usr/local/lib/R/site-library/00LOCK-sf/00new/sf/libs
1391** R
1392** demo
1393** inst
1394** byte-compile and prepare package for lazy loading
1395in method for ‘dbWriteTable’ with signature ‘"PostgreSQLConnection","character","sf"’: no definition for class “PostgreSQLConnection”
1396in method for ‘dbDataType’ with signature ‘"PostgreSQLConnection","sf"’: no definition for class “PostgreSQLConnection”
1397in method for ‘coerce’ with signature ‘"Spatial","sf"’: no definition for class “Spatial”
1398in method for ‘coerce’ with signature ‘"Spatial","sfc"’: no definition for class “Spatial”
1399in method for ‘coerce’ with signature ‘"sf","Spatial"’: no definition for class “Spatial”
1400in method for ‘coerce’ with signature ‘"sfc","Spatial"’: no definition for class “Spatial”
1401in method for ‘coerce’ with signature ‘"XY","Spatial"’: no definition for class “Spatial”
1402in method for ‘coerce’ with signature ‘"crs","CRS"’: no definition for class “CRS”
1403in method for ‘coerce’ with signature ‘"sgbp","sparseMatrix"’: no definition for class “sparseMatrix”
1404** help
1405*** installing help indices
1406*** copying figures
1407** building package indices
1408** installing vignettes
1409** testing if installed package can be loaded from temporary location
1410** checking absolute paths in shared objects and dynamic libraries
1411** testing if installed package can be loaded from final location
1412** testing if installed package keeps a record of temporary installation path
1413* DONE (sf)
1414Downloading package from url: https://ftp.gwdg.de/pub/misc/cran/src/contrib/plotrix_3.8-4.tar.gz
1415Installing package into ‘/usr/local/lib/R/site-library’
1416(as ‘lib’ is unspecified)
1417* installing *source* package ‘plotrix’ ...
1418** package ‘plotrix’ successfully unpacked and MD5 sums checked
1419** using staged installation
1420** R
1421** data
1422** demo
1423** inst
1424** byte-compile and prepare package for lazy loading
1425** help
1426*** installing help indices
1427** building package indices
1428** testing if installed package can be loaded from temporary location
1429** testing if installed package can be loaded from final location
1430** testing if installed package keeps a record of temporary installation path
1431* DONE (plotrix)
1432Downloading package from url: https://ftp.gwdg.de/pub/misc/cran/src/contrib/RUnit_0.4.33.tar.gz
1433Installing package into ‘/usr/local/lib/R/site-library’
1434(as ‘lib’ is unspecified)
1435* installing *source* package ‘RUnit’ ...
1436** package ‘RUnit’ successfully unpacked and MD5 sums checked
1437** using staged installation
1438** R
1439** inst
1440** byte-compile and prepare package for lazy loading
1441** help
1442*** installing help indices
1443** building package indices
1444** installing vignettes
1445** testing if installed package can be loaded from temporary location
1446** testing if installed package can be loaded from final location
1447** testing if installed package keeps a record of temporary installation path
1448* DONE (RUnit)
1449>
1450>
1451$ R --vanilla -e 'packager::rcmdcheck_and_log(".", build_args = c("--no-manual", "--no-build-vignettes"))'
1452R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
1453Copyright (C) 2024 The R Foundation for Statistical Computing
1454Platform: x86_64-pc-linux-gnu (64-bit)
1455R is free software and comes with ABSOLUTELY NO WARRANTY.
1456You are welcome to redistribute it under certain conditions.
1457Type 'license()' or 'licence()' for distribution details.
1458 Natural language support but running in an English locale
1459R is a collaborative project with many contributors.
1460Type 'contributors()' for more information and
1461'citation()' on how to cite R or R packages in publications.
1462Type 'demo()' for some demos, 'help()' for on-line help, or
1463'help.start()' for an HTML browser interface to help.
1464Type 'q()' to quit R.
1465> packager::rcmdcheck_and_log(".", build_args = c("--no-manual", "--no-build-vignettes"))
1466=== packager info:structure(list(R.version = list(platform = "x86_64-pc-linux-gnu",
1467=== packager info: arch = "x86_64", os = "linux-gnu", system = "x86_64, linux-gnu",
1468=== packager info: status = "", major = "4", minor = "3.3", year = "2024", month = "02",
1469=== packager info: day = "29", "svn rev" = "86002", language = "R", version.string = "R version 4.3.3 (2024-02-29)",
1470=== packager info: nickname = "Angel Food Cake"), platform = "x86_64-pc-linux-gnu (64-bit)",
1471=== packager info: locale = "LC_CTYPE=en_US.UTF-8;LC_NUMERIC=C;LC_TIME=en_US.UTF-8;LC_COLLATE=en_US.UTF-8;LC_MONETARY=en_US.UTF-8;LC_MESSAGES=en_US.UTF-8;LC_PAPER=en_US.UTF-8;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=en_US.UTF-8;LC_IDENTIFICATION=C",
1472=== packager info: tzone = "Etc/UTC", tzcode_type = "system (glibc)", running = "Ubuntu 22.04.4 LTS",
1473=== packager info: RNGkind = c("Mersenne-Twister", "Inversion", "Rejection"),
1474=== packager info: basePkgs = c("stats", "graphics", "grDevices", "utils", "datasets",
1475=== packager info: "methods", "base"), loadedOnly = list(httr = structure(list(
1476=== packager info: Package = "httr", Title = "Tools for Working with URLs and HTTP",
1477=== packager info: Version = "1.4.7", "Authors@R" = "c(\n person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = c(\"aut\", \"cre\")),\n person(\"Posit, PBC\", role = c(\"cph\", \"fnd\"))\n )",
1478=== packager info: Description = "Useful tools for working with HTTP organised by HTTP verbs\n (GET(), POST(), etc). Configuration functions make it easy to control\n additional request components (authenticate(), add_headers() and so\n on).",
1479=== packager info: License = "MIT + file LICENSE", URL = "https://httr.r-lib.org/, https://github.com/r-lib/httr",
1480=== packager info: BugReports = "https://github.com/r-lib/httr/issues",
1481=== packager info: Depends = "R (>= 3.5)", Imports = "curl (>= 5.0.2), jsonlite, mime, openssl (>= 0.8), R6",
1482=== packager info: Suggests = "covr, httpuv, jpeg, knitr, png, readr, rmarkdown, testthat\n(>= 0.8.0), xml2",
1483=== packager info: VignetteBuilder = "knitr", "Config/Needs/website" = "tidyverse/tidytemplate",
1484=== packager info: Encoding = "UTF-8", RoxygenNote = "7.2.3", NeedsCompilation = "no",
1485=== packager info: Packaged = "2023-08-15 02:56:56 UTC; hadleywickham",
1486=== packager info: Author = "Hadley Wickham [aut, cre],\n Posit, PBC [cph, fnd]",
1487=== packager info: Maintainer = "Hadley Wickham <hadley@posit.co>", Repository = "RSPM",
1488=== packager info: "Date/Publication" = "2023-08-15 09:00:02 UTC", Built = "R 4.3.0; ; 2023-08-16 11:12:55 UTC; unix"), class = "packageDescription", file = "/usr/local/lib/R/site-library/httr/Meta/package.rds"),
1489=== packager info: compiler = structure(list(Package = "compiler", Version = "4.3.3",
1490=== packager info: Priority = "base", Title = "The R Compiler Package",
1491=== packager info: Author = "Luke Tierney <luke-tierney@uiowa.edu>",
1492=== packager info: Maintainer = "R Core Team <do-use-Contact-address@r-project.org>",
1493=== packager info: Contact = "R-help mailing list <r-help@r-project.org>",
1494=== packager info: Description = "Byte code compiler for R.", License = "Part of R 4.3.3",
1495=== packager info: Built = "R 4.3.3; ; 2024-03-29 16:32:39 UTC; unix"), class = "packageDescription", file = "/usr/local/lib/R/library/compiler/Meta/package.rds"),
1496=== packager info: R6 = structure(list(Package = "R6", Title = "Encapsulated Classes with Reference Semantics",
1497=== packager info: Version = "2.5.1", "Authors@R" = "person(\"Winston\", \"Chang\", role = c(\"aut\", \"cre\"), email = \"winston@stdout.org\")",
1498=== packager info: Description = "Creates classes with reference semantics, similar to R's built-in\n reference classes. Compared to reference classes, R6 classes are simpler\n and lighter-weight, and they are not built on S4 classes so they do not\n require the methods package. These classes allow public and private\n members, and they support inheritance, even when the classes are defined in\n different packages.",
1499=== packager info: Depends = "R (>= 3.0)", Suggests = "testthat, pryr",
1500=== packager info: License = "MIT + file LICENSE", URL = "https://r6.r-lib.org, https://github.com/r-lib/R6/",
1501=== packager info: BugReports = "https://github.com/r-lib/R6/issues",
1502=== packager info: RoxygenNote = "7.1.1", NeedsCompilation = "no", Packaged = "2021-08-06 20:18:46 UTC; winston",
1503=== packager info: Author = "Winston Chang [aut, cre]", Maintainer = "Winston Chang <winston@stdout.org>",
1504=== packager info: Repository = "RSPM", "Date/Publication" = "2021-08-19 14:00:05 UTC",
1505=== packager info: Encoding = "UTF-8", Built = "R 4.3.0; ; 2023-04-21 21:51:10 UTC; unix"), class = "packageDescription", file = "/usr/local/lib/R/site-library/R6/Meta/package.rds"),
1506=== packager info: packager = structure(list(Package = "packager", Title = "Create, Build and Maintain Packages",
1507=== packager info: Version = "1.15.2.9000", "Authors@R" = "\n person(given = \"Andreas Dominik\",\n family = \"Cullmann\",\n role = c(\"aut\", \"cre\"),\n email = \"fvafrcu@mailbox.org\")",
1508=== packager info: Description = "Helper functions for package creation, building and\n maintenance. Designed to work with a build system such as 'GNU make' or\n package 'fakemake' to help you to conditionally work through the stages of\n package development (such as spell checking, linting, testing, before\n building and checking a package).",
1509=== packager info: License = "BSD_2_clause + file LICENSE", URL = "https://gitlab.com/fvafrcu/packager",
1510=== packager info: Depends = "R (>= 3.3.0)", Imports = "callr, checkmate, codetools, crayon, cyclocomp, desc, fakemake\n(>= 1.10.1), fritools (>= 3.4.0), fs, gert, httr, pkgbuild,\npkgload, rcmdcheck, remotes, rhub, rprojroot, tinytest, tools,\nwhisker, whoami",
1511=== packager info: Suggests = "cleanr, covr, devtools, digest, document, knitr, lintr,\nrasciidoc (>= 3.0.1), rmarkdown, roxygen2, RUnit, stats,\nspelling, testthat, usethis, withr",
1512=== packager info: VignetteBuilder = "rasciidoc", Encoding = "UTF-8",
1513=== packager info: RoxygenNote = "7.2.3", RemoteType = "gitlab", RemoteHost = "gitlab.com",
1514=== packager info: RemoteRepo = "packager", RemoteUsername = "fvafrcu",
1515=== packager info: RemoteRef = "HEAD", RemoteSha = "e8a82dfba5e49e749dac553d4691498fe67ecb94",
1516=== packager info: NeedsCompilation = "no", Packaged = "2024-04-03 21:40:40 UTC; root",
1517=== packager info: Author = "Andreas Dominik Cullmann [aut, cre]", Maintainer = "Andreas Dominik Cullmann <fvafrcu@mailbox.org>",
1518=== packager info: Built = "R 4.3.3; ; 2024-04-03 21:40:41 UTC; unix"), class = "packageDescription", file = "/usr/local/lib/R/site-library/packager/Meta/package.rds"),
1519=== packager info: fritools = structure(list(Package = "fritools", Title = "Utilities for the Forest Research Institute of the State\nBaden-Wuerttemberg",
1520=== packager info: Version = "4.3.0.9000", "Authors@R" = "\n person(given = \"Andreas Dominik\",\n family = \"Cullmann\",\n role = c(\"aut\", \"cre\"),\n email = \"fvafrcu@mailbox.org\")",
1521=== packager info: Description = "Miscellaneous utilities, tools and helper\n functions for finding and searching files on disk, searching for and\n removing R objects from the workspace.\n Does not import or depend on any third party package, but on core R \n only (i.e. it may depend on packages with priority 'base').",
1522=== packager info: License = "BSD_2_clause + file LICENSE", URL = "https://gitlab.com/fvafrcu/fritools",
1523=== packager info: Depends = "R (>= 3.3.0)", Imports = "methods, stats, utils",
1524=== packager info: Suggests = "callr, checkmate, covr, desc, devtools, digest, dplyr,\nmicrobenchmark, pkgload, reshape, rmarkdown, RUnit, testthat\n(>= 3.0.0), tinytest, whoami",
1525=== packager info: Encoding = "UTF-8", Language = "en-US", RoxygenNote = "7.3.1",
1526=== packager info: VignetteBuilder = "utils", "Config/testthat/edition" = "3",
1527=== packager info: RemoteType = "xgit", RemoteUrl = "https://gitlab.com/fvafrCU/fritools",
1528=== packager info: RemoteSha = "a66acb4498a5f721ccddb98636c5ab38c13b8ef1",
1529=== packager info: NeedsCompilation = "no", Packaged = "2024-04-03 21:40:14 UTC; root",
1530=== packager info: Author = "Andreas Dominik Cullmann [aut, cre]", Maintainer = "Andreas Dominik Cullmann <fvafrcu@mailbox.org>",
1531=== packager info: Built = "R 4.3.3; ; 2024-04-03 21:40:15 UTC; unix"), class = "packageDescription", file = "/usr/local/lib/R/site-library/fritools/Meta/package.rds"),
1532=== packager info: jsonlite = structure(list(Package = "jsonlite", Version = "1.8.8",
1533=== packager info: Title = "A Simple and Robust JSON Parser and Generator for R",
1534=== packager info: License = "MIT + file LICENSE", Depends = "methods",
1535=== packager info: "Authors@R" = "c(\n person(\"Jeroen\", \"Ooms\", role = c(\"aut\", \"cre\"), email = \"jeroen@berkeley.edu\",\n comment = c(ORCID = \"0000-0002-4035-0289\")),\n person(\"Duncan\", \"Temple Lang\", role = \"ctb\"),\n person(\"Lloyd\", \"Hilaiel\", role = \"cph\", comment=\"author of bundled libyajl\"))",
1536=== packager info: URL = "https://jeroen.r-universe.dev/jsonlite\nhttps://arxiv.org/abs/1403.2805",
1537=== packager info: BugReports = "https://github.com/jeroen/jsonlite/issues",
1538=== packager info: Maintainer = "Jeroen Ooms <jeroen@berkeley.edu>",
1539=== packager info: VignetteBuilder = "knitr, R.rsp", Description = "A reasonably fast JSON parser and generator, optimized for statistical \n data and the web. Offers simple, flexible tools for working with JSON in R, and\n is particularly powerful for building pipelines and interacting with a web API. \n The implementation is based on the mapping described in the vignette (Ooms, 2014).\n In addition to converting JSON data from/to R objects, 'jsonlite' contains \n functions to stream, validate, and prettify JSON data. The unit tests included \n with the package verify that all edge cases are encoded and decoded consistently \n for use with dynamic data in systems and applications.",
1540=== packager info: Suggests = "httr, vctrs, testthat, knitr, rmarkdown, R.rsp, sf",
1541=== packager info: RoxygenNote = "7.2.3", Encoding = "UTF-8", NeedsCompilation = "yes",
1542=== packager info: Packaged = "2023-12-04 12:57:12 UTC; jeroen", Author = "Jeroen Ooms [aut, cre] (<https://orcid.org/0000-0002-4035-0289>),\n Duncan Temple Lang [ctb],\n Lloyd Hilaiel [cph] (author of bundled libyajl)",
1543=== packager info: Repository = "RSPM", "Date/Publication" = "2023-12-04 15:20:02 UTC",
1544=== packager info: Built = "R 4.3.0; x86_64-pc-linux-gnu; 2023-12-05 15:35:32 UTC; unix"), class = "packageDescription", file = "/usr/local/lib/R/site-library/jsonlite/Meta/package.rds"),
1545=== packager info: whoami = structure(list(Package = "whoami", Title = "Username, Full Name, Email Address, 'GitHub' Username of the\nCurrent User",
1546=== packager info: Version = "1.3.0", "Authors@R" = "c(person(given = \"Gábor\",\n family = \"Csárdi\", \n email = \"csardi.gabor@gmail.com\", \n role = c(\"aut\", \"cre\")),\n person(given = \"Maëlle\",\n family = \"Salmon\",\n role = \"ctb\"))",
1547=== packager info: Description = "Look up the username and full name of the current user,\n the current user's email address and 'GitHub' username,\n using various sources of system and configuration information.",
1548=== packager info: License = "MIT + file LICENSE", URL = "https://github.com/r-lib/whoami#readme",
1549=== packager info: BugReports = "https://github.com/r-lib/whoami/issues",
1550=== packager info: Imports = "httr, jsonlite, utils", Suggests = "covr, mockery, testthat, withr",
1551=== packager info: Encoding = "UTF-8", RoxygenNote = "6.1.1", NeedsCompilation = "no",
1552=== packager info: Packaged = "2019-03-19 11:47:24 UTC; gaborcsardi",
1553=== packager info: Author = "Gábor Csárdi [aut, cre],\n Maëlle Salmon [ctb]",
1554=== packager info: Maintainer = "Gábor Csárdi <csardi.gabor@gmail.com>",
1555=== packager info: Repository = "RSPM", "Date/Publication" = "2019-03-19 12:00:03 UTC",
1556=== packager info: Built = "R 4.3.0; ; 2023-04-22 08:15:15 UTC; unix"), class = "packageDescription", file = "/usr/local/lib/R/site-library/whoami/Meta/package.rds")),
1557=== packager info: matprod = "default", BLAS = "/usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3",
1558=== packager info: LAPACK = "/usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblasp-r0.3.20.so",
1559=== packager info: LA_version = "3.10.0"), class = "sessionInfo")
1560── R CMD build ─────────────────────────────────────────────────────────────────
1561* checking for file ‘.../DESCRIPTION’ ... OK
1562* preparing ‘treePlotArea’:
1563* checking DESCRIPTION meta-information ... OK
1564* checking for LF line-endings in source and make files and shell scripts
1565* checking for empty or unneeded directories
1566* building ‘treePlotArea_2.1.0.tar.gz’
1567── R CMD check ─────────────────────────────────────────────────────────────────
1568* using log directory ‘/tmp/RtmpHVjYCr/file14d71d2f0e3e/treePlotArea.Rcheck’
1569* using R version 4.3.3 (2024-02-29)
1570* using platform: x86_64-pc-linux-gnu (64-bit)
1571* R was compiled by
1572 gcc (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0
1573 GNU Fortran (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0
1574* running under: Ubuntu 22.04.4 LTS
1575* using session charset: UTF-8
1576* using options ‘--no-manual --no-build-vignettes --as-cran’
1577* checking for file ‘treePlotArea/DESCRIPTION’ ... OK
1578* this is package ‘treePlotArea’ version ‘2.1.0’
1579* package encoding: UTF-8
1580* checking CRAN incoming feasibility ... [5s/15s] NOTE
1581Maintainer: ‘Andreas Dominik Cullmann <fvafrcu@mailbox.org>’
1582Package has a VignetteBuilder field but no prebuilt vignette index.
1583* checking package namespace information ... OK
1584* checking package dependencies ... OK
1585* checking if this is a source package ... OK
1586* checking if there is a namespace ... OK
1587* checking for executable files ... OK
1588* checking for hidden files and directories ... OK
1589* checking for portable file names ... OK
1590* checking for sufficient/correct file permissions ... OK
1591* checking whether package ‘treePlotArea’ can be installed ... OK
1592* checking installed package size ... OK
1593* checking package directory ... OK
1594* checking for future file timestamps ... OK
1595* checking DESCRIPTION meta-information ... OK
1596* checking top-level files ... OK
1597* checking for left-over files ... OK
1598* checking index information ... OK
1599* checking package subdirectories ... OK
1600* checking R files for non-ASCII characters ... OK
1601* checking R files for syntax errors ... OK
1602* checking whether the package can be loaded ... OK
1603* checking whether the package can be loaded with stated dependencies ... OK
1604* checking whether the package can be unloaded cleanly ... OK
1605* checking whether the namespace can be loaded with stated dependencies ... OK
1606* checking whether the namespace can be unloaded cleanly ... OK
1607* checking loading without being on the library search path ... OK
1608* checking use of S3 registration ... OK
1609* checking dependencies in R code ... OK
1610* checking S3 generic/method consistency ... OK
1611* checking replacement functions ... OK
1612* checking foreign function calls ... OK
1613* checking R code for possible problems ... OK
1614* checking Rd files ... OK
1615* checking Rd metadata ... OK
1616* checking Rd line widths ... OK
1617* checking Rd cross-references ... OK
1618* checking for missing documentation entries ... OK
1619* checking for code/documentation mismatches ... OK
1620* checking Rd \usage sections ... OK
1621* checking Rd contents ... OK
1622* checking for unstated dependencies in examples ... OK
1623* checking contents of ‘data’ directory ... OK
1624* checking data for non-ASCII characters ... OK
1625* checking LazyData ... OK
1626* checking data for ASCII and uncompressed saves ... OK
1627* checking R/sysdata.rda ... OK
1628* checking files in ‘vignettes’ ... WARNING
1629Files in the 'vignettes' directory but no files in 'inst/doc':
1630 ‘An_Introduction_to_treePlotArea.Rnw’ ‘bibliography.bib’
1631 ‘teb_166_2_7.png’
1632* checking examples ... OK
1633* checking for unstated dependencies in ‘tests’ ... OK
1634* checking tests ...
1635 Running ‘runit.R’
1636 Running ‘testthat.R’
1637 Running ‘tinytest.R’
1638 [11s/11s] OK
1639* checking for unstated dependencies in vignettes ... OK
1640* checking package vignettes in ‘inst/doc’ ... WARNING
1641Directory 'inst/doc' does not exist.
1642Package vignette without corresponding single PDF/HTML:
1643 ‘An_Introduction_to_treePlotArea.Rnw’
1644* checking running R code from vignettes ...
1645 ‘An_Introduction_to_treePlotArea.Rnw’ using ‘UTF-8’... OK
1646 OK
1647* checking re-building of vignette outputs ... SKIPPED
1648* checking for non-standard things in the check directory ... OK
1649* checking for detritus in the temp directory ... OK
1650* DONE
1651Status: 2 WARNINGs, 1 NOTE
1652See
1653 ‘/tmp/RtmpHVjYCr/file14d71d2f0e3e/treePlotArea.Rcheck/00check.log’
1654for details.
1655=== packager rcmdcheck:structure(list(stdout = "* using log directory ‘/tmp/RtmpHVjYCr/file14d71d2f0e3e/treePlotArea.Rcheck’\n* using R version 4.3.3 (2024-02-29)\n* using platform: x86_64-pc-linux-gnu (64-bit)\n* R was compiled by\n gcc (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0\n GNU Fortran (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0\n* running under: Ubuntu 22.04.4 LTS\n* using session charset: UTF-8\n* using options ‘--no-manual --no-build-vignettes --as-cran’\n* checking for file ‘treePlotArea/DESCRIPTION’ ... OK\n* this is package ‘treePlotArea’ version ‘2.1.0’\n* package encoding: UTF-8\n* checking CRAN incoming feasibility ... [5s/15s] NOTE\nMaintainer: ‘Andreas Dominik Cullmann <fvafrcu@mailbox.org>’\n\nPackage has a VignetteBuilder field but no prebuilt vignette index.\n* checking package namespace information ... OK\n* checking package dependencies ... OK\n* checking if this is a source package ... OK\n* checking if there is a namespace ... OK\n* checking for executable files ... OK\n* checking for hidden files and directories ... OK\n* checking for portable file names ... OK\n* checking for sufficient/correct file permissions ... OK\n* checking whether package ‘treePlotArea’ can be installed ... OK\n* checking installed package size ... OK\n* checking package directory ... OK\n* checking for future file timestamps ... OK\n* checking DESCRIPTION meta-information ... OK\n* checking top-level files ... OK\n* checking for left-over files ... OK\n* checking index information ... OK\n* checking package subdirectories ... OK\n* checking R files for non-ASCII characters ... OK\n* checking R files for syntax errors ... OK\n* checking whether the package can be loaded ... OK\n* checking whether the package can be loaded with stated dependencies ... OK\n* checking whether the package can be unloaded cleanly ... OK\n* checking whether the namespace can be loaded with stated dependencies ... OK\n* checking whether the namespace can be unloaded cleanly ... OK\n* checking loading without being on the library search path ... OK\n* checking use of S3 registration ... OK\n* checking dependencies in R code ... OK\n* checking S3 generic/method consistency ... OK\n* checking replacement functions ... OK\n* checking foreign function calls ... OK\n* checking R code for possible problems ... OK\n* checking Rd files ... OK\n* checking Rd metadata ... OK\n* checking Rd line widths ... OK\n* checking Rd cross-references ... OK\n* checking for missing documentation entries ... OK\n* checking for code/documentation mismatches ... OK\n* checking Rd \\usage sections ... OK\n* checking Rd contents ... OK\n* checking for unstated dependencies in examples ... OK\n* checking contents of ‘data’ directory ... OK\n* checking data for non-ASCII characters ... OK\n* checking LazyData ... OK\n* checking data for ASCII and uncompressed saves ... OK\n* checking R/sysdata.rda ... OK\n* checking files in ‘vignettes’ ... WARNING\nFiles in the 'vignettes' directory but no files in 'inst/doc':\n ‘An_Introduction_to_treePlotArea.Rnw’ ‘bibliography.bib’\n ‘teb_166_2_7.png’\n* checking examples ... OK\n* checking for unstated dependencies in ‘tests’ ... OK\n* checking tests ...\n Running ‘runit.R’\n Running ‘testthat.R’\n Running ‘tinytest.R’\n [11s/11s] OK\n* checking for unstated dependencies in vignettes ... OK\n* checking package vignettes in ‘inst/doc’ ... WARNING\nDirectory 'inst/doc' does not exist.\nPackage vignette without corresponding single PDF/HTML:\n ‘An_Introduction_to_treePlotArea.Rnw’\n* checking running R code from vignettes ...\n ‘An_Introduction_to_treePlotArea.Rnw’ using ‘UTF-8’... OK\n OK\n* checking re-building of vignette outputs ... SKIPPED\n* checking for non-standard things in the check directory ... OK\n* checking for detritus in the temp directory ... OK\n* DONE\n\nStatus: 2 WARNINGs, 1 NOTE\nSee\n ‘/tmp/RtmpHVjYCr/file14d71d2f0e3e/treePlotArea.Rcheck/00check.log’\nfor details.\n\n\n",
1656=== packager rcmdcheck: stderr = character(0), status = 0L, duration = 49.7053453922272,
1657=== packager rcmdcheck: timeout = FALSE, rversion = "4.3.3", platform = "x86_64-pc-linux-gnu",
1658=== packager rcmdcheck: errors = character(0), warnings = c("checking files in ‘vignettes’ ... WARNING\nFiles in the 'vignettes' directory but no files in 'inst/doc':\n ‘An_Introduction_to_treePlotArea.Rnw’ ‘bibliography.bib’\n ‘teb_166_2_7.png’",
1659=== packager rcmdcheck: "checking package vignettes in ‘inst/doc’ ... WARNING\nDirectory 'inst/doc' does not exist.\nPackage vignette without corresponding single PDF/HTML:\n ‘An_Introduction_to_treePlotArea.Rnw’"
1660=== packager rcmdcheck: ), notes = "checking CRAN incoming feasibility ... [5s/15s] NOTE\nMaintainer: ‘Andreas Dominik Cullmann <fvafrcu@mailbox.org>’\n\nPackage has a VignetteBuilder field but no prebuilt vignette index.",
1661=== packager rcmdcheck: description = "Package: treePlotArea\nTitle: Correction Factors for Tree Plot Areas Intersected by Stand\n Boundaries\nVersion: 2.1.0\nAuthors@R: \n c(person(\"Andreas Dominik\", \"Cullmann\", , \"fvafrcu@mailbox.org\", \n role = c(\"aut\", \"cre\")),\n person(given = \"Bernhard\",\n family = \"Bösch\",\n role = \"ctb\"),\n person(given = \"Christoph\",\n family = \"Fischer\",\n role = \"ctb\"),\n person(given = \"Gerald\",\n family = \"Kändler\",\n role = \"ctb\")\n )\nDescription: The German national forest inventory uses angle count sampling, \n a sampling method first published as `Bitterlich, W.: Die Winkelzählmessung.\n Allgemeine Forst- und Holzwirtschaftliche Zeitung, 58. Jahrg., Folge 11/12 \n vom Juni 1947` and extended by Grosenbaugh\n (<https://academic.oup.com/jof/article-abstract/50/1/32/4684174>)\n as probability proportional to size sampling.\n When plots are located near stand boundaries, their sizes and hence\n their probabilities need to be corrected.\nLicense: BSD_2_clause + file LICENSE\nURL: https://gitlab.com/fvafrcu/treeplotarea.git\nDepends: R (>= 4.0.0)\nImports: fritools, graphics, sf, stats\nSuggests: checkmate, pkgload, plotrix, rmarkdown, rprojroot, RUnit,\n testthat, tinytest\nVignetteBuilder: utils\nEncoding: UTF-8\nLanguage: en-US\nLazyData: true\nRoxygenNote: 7.3.1\nNeedsCompilation: no\nPackaged: 2024-04-03 21:47:43 UTC; root\nAuthor: Andreas Dominik Cullmann [aut, cre],\n Bernhard Bösch [ctb],\n Christoph Fischer [ctb],\n Gerald Kändler [ctb]\nMaintainer: Andreas Dominik Cullmann <fvafrcu@mailbox.org>",
1662=== packager rcmdcheck: package = "treePlotArea", version = "2.1.0", cran = FALSE,
1663=== packager rcmdcheck: bioc = FALSE, checkdir = "/tmp/RtmpHVjYCr/file14d71d2f0e3e/treePlotArea.Rcheck",
1664=== packager rcmdcheck: test_fail = structure(list(), names = character(0)), test_output = list(
1665=== packager rcmdcheck: runit = "> #!/usr/bin/Rscript --vanilla\n> is_failure <- function(result) {\n+ res <- RUnit::getErrors(result)\n+ names(res) <- tolower(names(res)) # soothe lintr\n+ sum_of_exceptions <- res[[\"nerr\"]] + res[[\"nfail\"]]\n+ fail <- as.logical(sum_of_exceptions)\n+ return(fail)\n+ }\n> \n> if (interactive()) {\n+ pkgload::load_all(path = \".\") # needed to use pkgload's shim version of\n+ # base's system.file\n+ unit_dir <- system.file(\"inst\", \"runit_tests\", package = \"treePlotArea\")\n+ } else {\n+ require(\"treePlotArea\", quietly = TRUE, character.only = TRUE) ||\n+ pkgload::load_all(path = \".\") # needed to use pkgload's shim version of\n+ r_call <- commandArgs(trailingOnly = FALSE)\n+ if (any(grepl(\"--file\", r_call))) {\n+ unit_dir <- file.path(\"inst\", \"runit_tests\")\n+ } else {\n+ unit_dir <- system.file(\"runit_tests\", package = \"treePlotArea\")\n+ }\n+ }\n\nAttaching package: 'treePlotArea'\n\nThe following object is masked from 'package:datasets':\n\n trees\n\n> if (! dir.exists(unit_dir)) {\n+ stop(\"Can not find RUnit test directory \", unit_dir,\n+ \". Try to (re)install the package first.\")\n+ }\n> setup_file <- file.path(unit_dir, \"setup.R\")\n> if (file.exists(setup_file)) source(setup_file)\n> package_suite <- RUnit::defineTestSuite(\"treePlotArea_unit_test\",\n+ dirs = unit_dir,\n+ testFileRegexp = \"^runit.*\\\\.[rR]\",\n+ testFuncRegexp = \"^test_+\")\n> test_result <- RUnit::runTestSuite(package_suite)\n\n\nExecuting test function test_check_boundaries ... Error in treePlotArea:::check_boundaries(boundary) : \n Found boundary through the plot in corner 5 of tract 9999! \nStopping.\nIn addition: Warning messages:\n1: In RNGkind(kind = testSuite$rngKind, normal.kind = testSuite$rngNormalKind) :\n RNGkind: Marsaglia-Multicarry has poor statistical properties\n2: In RNGkind(kind = testSuite$rngKind, normal.kind = testSuite$rngNormalKind) :\n RNGkind: severe deviations from normality for Kinderman-Ramage + Marsaglia-Multicarry\nError in treePlotArea:::check_boundaries(boundary) : \n Found boundary through the plot in corner 5 of tract 9999! \nStopping.\n done successfully.\n\n\n\nExecuting test function test_get_boundary_polygons ... Error in check_boundaries(current_boundaries, stop_on_error = stop_on_error, : \n \n Found boundary through the plot in corner 2 of tract 2607! \nStopping.\n done successfully.\n\n\n\nExecuting test function test_get_boundary_radius ... done successfully.\n\n\n\nExecuting test function test_check_tree ... done successfully.\n\n\n\nExecuting test function test_get_correction_factor ... done successfully.\n\n\n\nExecuting test function test_get_correction_factors ... \r | \r | | 0%\r | \r | | 1%\r | \r |= | 1%\r | \r |= | 2%\r | \r |== | 2%\r | \r |== | 3%\r | \r |=== | 4%\r | \r |=== | 5%\r | \r |==== | 5%\r | \r |==== | 6%\r | \r |===== | 6%\r | \r |===== | 7%\r | \r |===== | 8%\r | \r |====== | 8%\r | \r |====== | 9%\r | \r |======= | 9%\r | \r |======= | 10%\r | \r |======= | 11%\r | \r |======== | 11%\r | \r |======== | 12%\r | \r |========= | 12%\r | \r |========= | 13%\r | \r |========== | 14%\r | \r |========== | 15%\r | \r |=========== | 15%\r | \r |=========== | 16%\r | \r 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|====================================================== | 77%\r | \r |====================================================== | 78%\r | \r |======================================================= | 78%\r | \r |======================================================= | 79%\r | \r |======================================================== | 79%\r | \r |======================================================== | 80%\r | \r |======================================================== | 81%\r | \r |========================================================= | 81%\r | \r |========================================================= | 82%\r | \r |========================================================== | 82%\r | \r |========================================================== | 83%\r | \r |========================================================== | 84%\r | \r |=========================================================== | 84%\r | \r |=========================================================== | 85%\r | \r |============================================================ | 85%\r | \r |============================================================ | 86%\r | \r |============================================================= | 87%\r | \r |============================================================= | 88%\r | \r |============================================================== | 88%\r | \r |============================================================== | 89%\r | \r |=============================================================== | 89%\r | \r |=============================================================== | 90%\r | \r |=============================================================== | 91%\r | \r |================================================================ | 91%\r | \r |================================================================ | 92%\r | \r |================================================================= | 92%\r | \r |================================================================= | 93%\r | \r |================================================================= | 94%\r | \r |================================================================== | 94%\r | \r |================================================================== | 95%\r | \r |=================================================================== | 95%\r | \r |=================================================================== | 96%\r | \r |==================================================================== | 97%\r | \r |==================================================================== | 98%\r | \r |===================================================================== | 98%\r | \r |===================================================================== | 99%\r | \r |======================================================================| 99%\r | \r |======================================================================| 100%\n done successfully.\n\n\n\nExecuting test function test_options ... Error in set_options(not_defined = ol[[\"angle_counts\"]], boundaries = ol[[\"boundaries\"]]) : \n Option(s) `not_defined` not defined as default(s) for package treePlotArea.\nIn addition: Warning messages:\n1: In RNGkind(kind = testSuite$rngKind, normal.kind = testSuite$rngNormalKind) :\n RNGkind: Marsaglia-Multicarry has poor statistical properties\n2: In RNGkind(kind = testSuite$rngKind, normal.kind = testSuite$rngNormalKind) :\n RNGkind: severe deviations from normality for Kinderman-Ramage + Marsaglia-Multicarry\n3: In RNGkind(kind = testSuite$rngKind, normal.kind = testSuite$rngNormalKind) :\n RNGkind: Marsaglia-Multicarry has poor statistical properties\n4: In RNGkind(kind = testSuite$rngKind, normal.kind = testSuite$rngNormalKind) :\n RNGkind: severe deviations from normality for Kinderman-Ramage + Marsaglia-Multicarry\n5: In RNGkind(kind = testSuite$rngKind, normal.kind = testSuite$rngNormalKind) :\n RNGkind: Marsaglia-Multicarry has poor statistical properties\n6: In RNGkind(kind = testSuite$rngKind, normal.kind = testSuite$rngNormalKind) :\n RNGkind: severe deviations from normality for Kinderman-Ramage + Marsaglia-Multicarry\nError in set_options(angle_counts = ol[[\"angle_counts\"]], boundaries = ol[[\"boundaries\"]]) : \n Options for angle_counts may not contain `NOT_DEF` for package treePlotArea.\n done successfully.\n\n\n\nExecuting test function test_exception ... Error in eval(expr, envir = parent.frame()) : Hello, error!\nIn addition: Warning messages:\n1: In RNGkind(kind = testSuite$rngKind, normal.kind = testSuite$rngNormalKind) :\n RNGkind: Marsaglia-Multicarry has poor statistical properties\n2: In RNGkind(kind = testSuite$rngKind, normal.kind = testSuite$rngNormalKind) :\n RNGkind: severe deviations from normality for Kinderman-Ramage + Marsaglia-Multicarry\n done successfully.\n\n> RUnit::printTextProtocol(test_result, showDetails = TRUE, fileName = \"\")\nRUNIT TEST PROTOCOL -- Wed Apr 3 21:48:25 2024 \n*********************************************** \nNumber of test functions: 8 \nNumber of errors: 0 \nNumber of failures: 0 \n\n \n1 Test Suite : \ntreePlotArea_unit_test - 8 test functions, 0 errors, 0 failures\n\n\n\nDetails \n*************************** \nTest Suite: treePlotArea_unit_test \nTest function regexp: ^test_+ \nTest file regexp: ^runit.*\\.[rR] \nInvolved directory: \n/tmp/RtmpHVjYCr/file14d71d2f0e3e/treePlotArea.Rcheck/treePlotArea/runit_tests \n--------------------------- \nTest file: /tmp/RtmpHVjYCr/file14d71d2f0e3e/treePlotArea.Rcheck/treePlotArea/runit_tests/runit-get_boundary_polygons.R \ntest_check_boundaries: (4 checks) ... OK (0.01 seconds)\ntest_get_boundary_polygons: (2 checks) ... OK (0.46 seconds)\n--------------------------- \nTest file: /tmp/RtmpHVjYCr/file14d71d2f0e3e/treePlotArea.Rcheck/treePlotArea/runit_tests/runit-get_boundary_radius.R \ntest_get_boundary_radius: (3 checks) ... OK (0 seconds)\n--------------------------- \nTest file: /tmp/RtmpHVjYCr/file14d71d2f0e3e/treePlotArea.Rcheck/treePlotArea/runit_tests/runit-get_correction_factors.R \ntest_check_tree: (2 checks) ... OK (0 seconds)\ntest_get_correction_factor: (2 checks) ... OK (2.85 seconds)\ntest_get_correction_factors: (2 checks) ... OK (5.77 seconds)\n--------------------------- \nTest file: /tmp/RtmpHVjYCr/file14d71d2f0e3e/treePlotArea.Rcheck/treePlotArea/runit_tests/runit-options.R \ntest_options: (5 checks) ... OK (0 seconds)\n--------------------------- \nTest file: /tmp/RtmpHVjYCr/file14d71d2f0e3e/treePlotArea.Rcheck/treePlotArea/runit_tests/runit-throw.R \ntest_exception: (1 checks) ... OK (0 seconds)\n> if (is_failure(test_result)) {\n+ RUnit::printTextProtocol(test_result, showDetails = TRUE)\n+ stop(\"RUnit failed.\")\n+ }\n> \n> proc.time()\n user system elapsed \n 9.241 0.161 9.277 \n",
1666=== packager rcmdcheck: testthat = "> library(\"testthat\")\n> library(\"treePlotArea\")\n\nAttaching package: 'treePlotArea'\n\nThe following object is masked from 'package:datasets':\n\n trees\n\n> \n> test_check(\"treePlotArea\")\n[ FAIL 0 | WARN 0 | SKIP 0 | PASS 1 ]\n> \n> proc.time()\n user system elapsed \n 0.395 0.131 0.399 \n",
1667=== packager rcmdcheck: tinytest = "> if (requireNamespace(\"tinytest\", quietly = TRUE)) {\n+ print(R.version)\n+ tinytest::test_package(\"treePlotArea\")\n+ }\n _ \nplatform x86_64-pc-linux-gnu \narch x86_64 \nos linux-gnu \nsystem x86_64, linux-gnu \nstatus \nmajor 4 \nminor 3.3 \nyear 2024 \nmonth 02 \nday 29 \nsvn rev 86002 \nlanguage R \nversion.string R version 4.3.3 (2024-02-29)\nnickname Angel Food Cake \n\nAttaching package: 'treePlotArea'\n\nThe following object is masked from 'package:datasets':\n\n trees\n\n\rtest_check_boundaries.R....... 0 tests \rtest_check_boundaries.R....... 0 tests \rtest_check_boundaries.R....... 0 tests \rtest_check_boundaries.R....... 0 tests \rtest_check_boundaries.R....... 1 tests \033[0;32mOK\033[0m \033[0;36m31ms\033[0m\n\rtest_get_boundary_radius.R.... 0 tests \rtest_get_boundary_radius.R.... 0 tests \rtest_get_boundary_radius.R.... 1 tests \033[0;32mOK\033[0m \rtest_get_boundary_radius.R.... 1 tests \033[0;32mOK\033[0m \rtest_get_boundary_radius.R.... 2 tests \033[0;32mOK\033[0m \033[0;36m15ms\033[0m\n\rtest_plot.R................... 0 tests \rtest_plot.R................... 0 tests \rtest_plot.R................... 0 tests \rtest_plot.R................... 0 tests \rtest_plot.R................... 0 tests \rtest_plot.R................... 0 tests \rtest_plot.R................... 0 tests \rtest_plot.R................... 0 tests \rtest_plot.R................... 0 tests \rtest_plot.R................... 0 tests \rtest_plot.R................... 0 tests \rtest_plot.R................... 1 tests \033[0;32mOK\033[0m \rtest_plot.R................... 1 tests \033[0;32mOK\033[0m \rtest_plot.R................... 1 tests \033[0;32mOK\033[0m \rtest_plot.R................... 2 tests \033[0;32mOK\033[0m \033[0;34m0.6s\033[0m\n\rtest_throw.R.................. 0 tests \rtest_throw.R.................. 1 tests \033[0;32mOK\033[0m \033[0;36m1ms\033[0m\nAll ok, 6 results (0.7s)\n> \n> proc.time()\n user system elapsed \n 0.848 0.139 0.859 \n"),
1668=== packager rcmdcheck: install_out = "* installing *source* package ‘treePlotArea’ ...\n** using staged installation\n** R\n** data\n*** moving datasets to lazyload DB\n** inst\n** byte-compile and prepare package for lazy loading\n** help\n*** installing help indices\n** building package indices\n** installing vignettes\n** testing if installed package can be loaded from temporary location\n** testing if installed package can be loaded from final location\n** testing if installed package keeps a record of temporary installation path\n* DONE (treePlotArea)\n",
1669=== packager rcmdcheck: session_info = structure(list(platform = structure(list(version = "R version 4.3.3 (2024-02-29)",
1670=== packager rcmdcheck: os = "Ubuntu 22.04.4 LTS", system = "x86_64, linux-gnu",
1671=== packager rcmdcheck: ui = "X11", language = "(EN)", collate = "C", ctype = "en_US.UTF-8",
1672=== packager rcmdcheck: tz = "Etc/UTC", date = "2024-04-03", pandoc = "3.1.1 @ /usr/local/bin/pandoc"), class = c("platform_info",
1673=== packager rcmdcheck: "list")), packages = structure(list(package = c("class",
1674=== packager rcmdcheck: "classInt", "DBI", "e1071", "fritools", "KernSmooth", "magrittr",
1675=== packager rcmdcheck: "MASS", "proxy", "Rcpp", "s2", "sf", "treePlotArea", "units",
1676=== packager rcmdcheck: "wk"), ondiskversion = c("7.3-22", "0.4-10", "1.2.2", "1.7-14",
1677=== packager rcmdcheck: "4.3.0.9000", "2.23-22", "2.0.3", "7.3-60.0.1", "0.4-27",
1678=== packager rcmdcheck: "1.0.12", "1.1.6", "1.0-16", "2.1.0", "0.8-5", "0.9.1"),
1679=== packager rcmdcheck: loadedversion = c(NA_character_, NA_character_, NA_character_,
1680=== packager rcmdcheck: NA_character_, NA_character_, NA_character_, NA_character_,
1681=== packager rcmdcheck: NA_character_, NA_character_, NA_character_, NA_character_,
1682=== packager rcmdcheck: NA_character_, NA_character_, NA_character_, NA_character_
1683=== packager rcmdcheck: ), path = c("/usr/local/lib/R/library/class", "/usr/local/lib/R/site-library/classInt",
1684=== packager rcmdcheck: "/usr/local/lib/R/site-library/DBI", "/usr/local/lib/R/site-library/e1071",
1685=== packager rcmdcheck: "/usr/local/lib/R/site-library/fritools", "/usr/local/lib/R/library/KernSmooth",
1686=== packager rcmdcheck: "/usr/local/lib/R/site-library/magrittr", "/usr/local/lib/R/library/MASS",
1687=== packager rcmdcheck: "/usr/local/lib/R/site-library/proxy", "/usr/local/lib/R/site-library/Rcpp",
1688=== packager rcmdcheck: "/usr/local/lib/R/site-library/s2", "/usr/local/lib/R/site-library/sf",
1689=== packager rcmdcheck: "/tmp/RtmpHVjYCr/file14d71d2f0e3e/treePlotArea.Rcheck/treePlotArea",
1690=== packager rcmdcheck: "/usr/local/lib/R/site-library/units", "/usr/local/lib/R/site-library/wk"
1691=== packager rcmdcheck: ), loadedpath = c(NA_character_, NA_character_, NA_character_,
1692=== packager rcmdcheck: NA_character_, NA_character_, NA_character_, NA_character_,
1693=== packager rcmdcheck: NA_character_, NA_character_, NA_character_, NA_character_,
1694=== packager rcmdcheck: NA_character_, NA_character_, NA_character_, NA_character_
1695=== packager rcmdcheck: ), attached = c(FALSE, FALSE, FALSE, FALSE, FALSE, FALSE,
1696=== packager rcmdcheck: FALSE, FALSE, FALSE, FALSE, FALSE, FALSE, FALSE, FALSE,
1697=== packager rcmdcheck: FALSE), is_base = c(FALSE, FALSE, FALSE, FALSE, FALSE,
1698=== packager rcmdcheck: FALSE, FALSE, FALSE, FALSE, FALSE, FALSE, FALSE, FALSE,
1699=== packager rcmdcheck: FALSE, FALSE), date = c("2023-05-03", "2023-09-05", "2024-02-16",
1700=== packager rcmdcheck: "2023-12-06", "2024-04-03", "2023-07-10", "2022-03-30",
1701=== packager rcmdcheck: "2024-01-13", "2022-06-09", "2024-01-09", "2023-12-19",
1702=== packager rcmdcheck: "2024-03-24", "2024-04-03", "2023-11-28", "2023-11-29"
1703=== packager rcmdcheck: ), source = c("CRAN (R 4.3.3)", "CRAN (R 4.3.3)", "RSPM (R 4.3.0)",
1704=== packager rcmdcheck: "CRAN (R 4.3.3)", "xgit (https://gitlab.com/fvafrCU/fritools@a66acb4498a5f721ccddb98636c5ab38c13b8ef1)",
1705=== packager rcmdcheck: "CRAN (R 4.3.3)", "RSPM (R 4.3.0)", "CRAN (R 4.3.3)",
1706=== packager rcmdcheck: "CRAN (R 4.3.3)", "RSPM (R 4.3.0)", "CRAN (R 4.3.3)",
1707=== packager rcmdcheck: "CRAN (R 4.3.3)", "local", "CRAN (R 4.3.3)", "CRAN (R 4.3.3)"
1708=== packager rcmdcheck: ), md5ok = c(NA, NA, NA, NA, NA, NA, NA, NA, NA, NA,
1709=== packager rcmdcheck: NA, NA, NA, NA, NA), library = structure(c(3L, 2L, 2L,
1710=== packager rcmdcheck: 2L, 2L, 3L, 2L, 3L, 2L, 2L, 2L, 2L, 1L, 2L, 2L), levels = c("/tmp/RtmpHVjYCr/file14d71d2f0e3e/treePlotArea.Rcheck",
1711=== packager rcmdcheck: "/usr/local/lib/R/site-library", "/usr/local/lib/R/library"
1712=== packager rcmdcheck: ), class = "factor")), row.names = c("class", "classInt",
1713=== packager rcmdcheck: "DBI", "e1071", "fritools", "KernSmooth", "magrittr", "MASS",
1714=== packager rcmdcheck: "proxy", "Rcpp", "s2", "sf", "treePlotArea", "units", "wk"
1715=== packager rcmdcheck: ), class = c("packages_info", "data.frame"))), class = c("session_info",
1716=== packager rcmdcheck: "list")), cleaner = <environment>), class = "rcmdcheck")
1717>
1718>
1719 Cleaning up project directory and file based variables 00:00
1720Job succeeded