Commit c3be3ff0 authored by Fei-man Hsu's avatar Fei-man Hsu
Browse files

20170802 commit

parent 6ff704e2
No preview for this file type
ALL Promoter 5UTR Exon Intron 3UTR Splice_site Repeats Intergenic
Genome 2060653601 37355117 12574937 39031481 77413200 14101473 267900 1720406932 1879909493
Genome(percentage) 1.000 0.018 0.006 0.019 0.038 0.007 0.000 0.835 0.912
RRBS 305027702 6093768 1917949 8019960 13678150 3109653 65584 245154770 272142638
RRBS(percentage) 1.000 0.020 0.006 0.026 0.045 0.010 0.000 0.804 0.892
Log2FC 0.000 0.140 0.043 0.473 0.255 0.575 0.726 -0.055 -0.032
ALL Promoter 5UTR Exon Intron 3UTR Splice_site Repeats Intergenic
Genome 2060653601 37355117 12574937 39031481 77413200 14101473 267900 1720406932 1879909493
Genome(percentage) 1.000 0.018 0.006 0.019 0.038 0.007 0.000 0.835 0.912
RRBS 565511128 13622681 2846911 6149536 26638124 4442513 83686 452360346 511727677
RRBS(percentage) 1.000 0.024 0.005 0.011 0.047 0.008 0.000 0.800 0.905
Log2FC 0.000 0.410 -0.278 -0.801 0.326 0.199 0.187 -0.062 -0.012
Enzyme Cutting_Site Size_Selection Genome_Size Fragment_Covered Fragment_Covered_Pct Total_Genes Covered_Genebody Covered_Genebody_Pct Log2_Fold_Enrichment_Genebody Covered_Pmt Covered_Pmt_Pct Log2_Fold_Enrichment_Pmt
MboI GATC 50-350 2060653601 649536570 0.315 38653 35098 0.908 1.526 29804 0.771 1.291
MluI ACGCGT 100-350 2060653601 1905399 0.001 38653 693 0.018 4.277 258 0.007 2.852
MnII CCTC 50-300 2060653601 684690057 0.332 38653 35411 0.916 1.463 28726 0.743 1.161
MscI TGGCCA 50-300 2060653601 8104300 0.004 38653 3416 0.088 4.490 792 0.020 2.381
MfeI CAATTG 40-280 2060653601 5949939 0.003 38653 2735 0.071 4.615 644 0.017 2.529
MfeI CAATTG 40-300 2060653601 6863377 0.003 38653 2902 0.075 4.495 699 0.018 2.441
MseI TTAA 40-300 2060653601 565511128 0.274 38653 29219 0.756 1.462 32600 0.843 1.620
MboI GATC 100-300 2060653601 451327905 0.219 38653 33031 0.855 1.964 25378 0.657 1.584
MboI GATC 100-350 2060653601 563209054 0.273 38653 34055 0.881 1.689 27475 0.711 1.379
MfeI CAATTG 50-300 2060653601 6668733 0.003 38653 2797 0.072 4.483 651 0.017 2.380
MseI TTAA 100-300 2060653601 427688755 0.208 38653 27330 0.707 1.768 29042 0.751 1.856
MspI CCGG 50-300 2060653601 378897343 0.184 38653 31634 0.818 2.154 21716 0.562 1.611
MboI GATC 40-280 2060653601 508445093 0.247 38653 34332 0.888 1.848 28105 0.727 1.559
MnII CCTC 40-300 2060653601 710527958 0.345 38653 35601 0.921 1.417 29257 0.757 1.134
MfeI CAATTG 100-350 2060653601 11454365 0.006 38653 2720 0.070 3.662 616 0.016 1.520
MluI ACGCGT 50-350 2060653601 2011472 0.001 38653 819 0.021 4.440 326 0.008 3.111
MseI TTAA 100-350 2060653601 514274861 0.250 38653 28230 0.730 1.549 30323 0.784 1.652
MseI TTAA 50-350 2060653601 628713466 0.305 38653 29587 0.765 1.327 32854 0.850 1.478
MspI CCGG 100-300 2060653601 295301025 0.143 38653 29481 0.763 2.412 18837 0.487 1.766
MspI CCGG 100-350 2060653601 364292416 0.177 38653 30501 0.789 2.158 20538 0.531 1.588
MnII CCTC 40-280 2060653601 665798471 0.323 38653 35442 0.917 1.505 28717 0.743 1.201
MspI CCGG 40-300 2060653601 390407681 0.189 38653 31906 0.825 2.123 22102 0.572 1.594
MfeI CAATTG 100-300 2060653601 5774393 0.003 38653 2200 0.057 4.344 479 0.012 2.145
MspI CCGG 50-350 2060653601 447888734 0.217 38653 32213 0.833 1.939 22961 0.594 1.450
MnII CCTC 100-350 2060653601 653310684 0.317 38653 34798 0.900 1.506 27404 0.709 1.161
MboI GATC 50-300 2060653601 537655421 0.261 38653 34438 0.891 1.772 28340 0.733 1.491
MnII CCTC 50-350 2060653601 790692776 0.384 38653 35850 0.927 1.273 30039 0.777 1.018
MluI ACGCGT 40-280 2060653601 1597698 0.001 38653 705 0.018 4.556 285 0.007 3.249
MluI ACGCGT 40-300 2060653601 1698631 0.001 38653 749 0.019 4.555 300 0.008 3.235
MscI TGGCCA 100-350 2060653601 10596679 0.005 38653 3328 0.086 4.065 775 0.020 1.963
MluI ACGCGT 100-300 2060653601 1575727 0.001 38653 585 0.015 4.307 212 0.005 2.842
MfeI CAATTG 50-350 2060653601 12348705 0.006 38653 3277 0.085 3.822 781 0.020 1.753
MboI GATC 40-300 2060653601 552131076 0.268 38653 34622 0.896 1.741 28749 0.744 1.473
MscI TGGCCA 40-300 2060653601 8183625 0.004 38653 3574 0.092 4.541 821 0.021 2.419
MspI CCGG 40-280 2060653601 366008049 0.178 38653 31650 0.819 2.205 21557 0.558 1.651
MscI TGGCCA 100-300 2060653601 7391578 0.004 38653 2785 0.072 4.328 614 0.016 2.147
MseI TTAA 50-300 2060653601 542127360 0.263 38653 28965 0.749 1.510 32165 0.832 1.661
MscI TGGCCA 40-280 2060653601 7574050 0.004 38653 3387 0.088 4.575 780 0.020 2.457
MscI TGGCCA 50-350 2060653601 11309401 0.005 38653 3916 0.101 4.206 948 0.025 2.160
MnII CCTC 100-300 2060653601 547307965 0.266 38653 33989 0.879 1.727 25367 0.656 1.305
MluI ACGCGT 50-300 2060653601 1681800 0.001 38653 715 0.018 4.502 282 0.007 3.160
MseI TTAA 40-280 2060653601 528672588 0.257 38653 28905 0.748 1.543 32317 0.836 1.704
This diff is collapsed.
This diff is collapsed.
File added
Markdown is supported
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment