systemd-tmpfiles fails: Directories already exist

Every boot, I'm getting the following errors from systemd-tmpfiles:

Jan 04 16:46:52 fedora systemd[1]: Starting systemd-tmpfiles-setup.service - Create System Files and Directories...
Jan 04 16:46:53 fedora systemd-tmpfiles[901]: /usr/lib/tmpfiles.d/var.conf:21: Duplicate line for path "/var/lib", ignoring.
Jan 04 16:46:53 fedora systemd-tmpfiles[901]: "/home" already exists and is not a directory.
Jan 04 16:46:53 fedora systemd-tmpfiles[901]: "/srv" already exists and is not a directory.
Jan 04 16:46:53 fedora systemd-tmpfiles[901]: "/root" already exists and is not a directory.
Jan 04 16:46:53 fedora systemd[1]: Finished systemd-tmpfiles-setup.service - Create System Files and Directories.

Running with the latest 43.20260104 image, though this issue has been present for at least a month (43.20251203 image)

It seems like nothing is breaking from this issue, but I'm not 100% sure.

On a non-atomic Fedora 43, this issue is not present.