Error in extract_buscos_phylo.py
I have run BUSCO in protein mode for several genomes, now I am facing an error when I want to run the phylogenomics script extract_buscos_phylo.py. I edited the directories and mapping_name
accordingly, but here is the error I get:
File "extract_buscos_phylo.py", line 136, in <module>
'%s%s' % (genesets, mapping_name[species][2]))
File "/scratch/viehboeck/phylo-stilbo/proteoms/fetch_best_sequence.py", line 32, in fetch
return _fetch_prot(busco_id, folder, full_table, gene_set)
File "/scratch/viehboeck/phylo-stilbo/proteoms/fetch_best_sequence.py", line 112, in _fetch_prot
id_to_return = _fetch_best(busco_id, folder, full_table)
File "/scratch/viehboeck/phylo-stilbo/proteoms/fetch_best_sequence.py", line 46, in _fetch_best
result_scores.append(float(entry[2]))
IndexError: list index out of range